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MA_651g0010


Description : Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana (sp|q9szl5|pp356_arath : 229.0)


Gene families : OG0010067 (Archaeplastida) Phylogenetic Tree(s): OG0010067_tree ,
OG_05_0010093 (LandPlants) Phylogenetic Tree(s): OG_05_0010093_tree ,
OG_06_0008325 (SeedPlants) Phylogenetic Tree(s): OG_06_0008325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_651g0010
Cluster HCCA: Cluster_459

Target Alias Description ECC score Gene Family Method Actions
Zm00001e026388_P001 No alias Pentatricopeptide repeat-containing protein At4g38150... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 100 149
IPR002885 Pentatricopeptide_repeat 174 203
IPR002885 Pentatricopeptide_repeat 72 97
No external refs found!