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  5. MA_65267g0010

MA_65267g0010


Description : plastidial mRNA processing factor (CRP1)


Gene families : OG0007267 (Archaeplastida) Phylogenetic Tree(s): OG0007267_tree ,
OG_05_0005245 (LandPlants) Phylogenetic Tree(s): OG_05_0005245_tree ,
OG_06_0009021 (SeedPlants) Phylogenetic Tree(s): OG_06_0009021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_65267g0010
Cluster HCCA: Cluster_354

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013362001 No alias Pentatricopeptide repeat-containing protein At5g42310,... 0.02 Archaeplastida
Gb_11328 No alias plastidial mRNA processing factor (CRP1) 0.02 Archaeplastida
Mp5g09810.1 No alias plastidial mRNA processing factor (CRP1) 0.02 Archaeplastida
Smo135281 No alias Pentatricopeptide repeat-containing protein At5g42310,... 0.02 Archaeplastida
Solyc08g045850.3.1 No alias plastidial mRNA processing factor (CRP1) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR033443 PPR_long 238 382
IPR002885 Pentatricopeptide_repeat 387 447
IPR002885 Pentatricopeptide_repeat 156 184
IPR002885 Pentatricopeptide_repeat 468 515
IPR002885 Pentatricopeptide_repeat 190 235
IPR002885 Pentatricopeptide_repeat 538 586
No external refs found!