Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 645.0)
Gene families : OG0007516 (Archaeplastida) Phylogenetic Tree(s): OG0007516_tree ,
OG_05_0000472 (LandPlants) Phylogenetic Tree(s): OG_05_0000472_tree ,
OG_06_0000277 (SeedPlants) Phylogenetic Tree(s): OG_06_0000277_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_658463g0010 | |
Cluster | HCCA: Cluster_197 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G02750 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Archaeplastida | |
GSVIVT01008407001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | Archaeplastida | |
Gb_05647 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | Archaeplastida | |
Gb_15476 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.07 | Archaeplastida | |
Gb_35268 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | Archaeplastida | |
Gb_35786 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.07 | Archaeplastida | |
LOC_Os09g15800.1 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | Archaeplastida | |
Zm00001e033826_P001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 196 | 224 |
IPR002885 | Pentatricopeptide_repeat | 168 | 195 |
IPR002885 | Pentatricopeptide_repeat | 532 | 556 |
IPR002885 | Pentatricopeptide_repeat | 299 | 322 |
IPR032867 | DYW_dom | 630 | 754 |
IPR002885 | Pentatricopeptide_repeat | 133 | 166 |
IPR002885 | Pentatricopeptide_repeat | 456 | 505 |
IPR002885 | Pentatricopeptide_repeat | 356 | 404 |
IPR002885 | Pentatricopeptide_repeat | 226 | 273 |
No external refs found! |