1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_65862g0010

MA_65862g0010


Description : Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana (sp|q9sn39|pp320_arath : 601.0)


Gene families : OG0011976 (Archaeplastida) Phylogenetic Tree(s): OG0011976_tree ,
OG_05_0093698 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0074685 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_65862g0010
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
Gb_21535 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_25843 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.06 Archaeplastida
MA_470679g0010 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.04 Archaeplastida
Smo116484 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 217 243
IPR002885 Pentatricopeptide_repeat 380 403
IPR002885 Pentatricopeptide_repeat 647 676
IPR032867 DYW_dom 680 800
IPR002885 Pentatricopeptide_repeat 273 301
IPR002885 Pentatricopeptide_repeat 506 554
IPR002885 Pentatricopeptide_repeat 405 453
IPR002885 Pentatricopeptide_repeat 142 189
IPR002885 Pentatricopeptide_repeat 304 352
No external refs found!