MA_6588g0010

Description : Pumilio homolog 3 OS=Arabidopsis thaliana (sp|q9zw02|pum3_arath : 124.0)

Gene families : OG0000536 (Archaeplastida) Phylogenetic Tree(s): OG0000536_tree ,
OG_05_0000342 (LandPlants) Phylogenetic Tree(s): OG_05_0000342_tree ,
OG_06_0000990 (SeedPlants) Phylogenetic Tree(s): OG_06_0000990_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_6588g0010
Cluster	HCCA: Cluster_326

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00251030	evm_27.TU.AmTr_v1...	Pumilio homolog 2 OS=Arabidopsis thaliana	0.02	Archaeplastida
AT3G20250	PUM5, APUM5	pumilio 5	0.02	Archaeplastida
Gb_31285	No alias	Pumilio homolog 2 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_23070g0010	No alias	Pumilio homolog 1 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Mp7g16700.1	No alias	Pumilio homolog 1 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Solyc03g123980.4.1	No alias	Pumilio homolog 5 OS=Arabidopsis thaliana...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood
MF	GO:0019781	NEDD8 activating enzyme activity	IEP	Neighborhood
BP	GO:0045116	protein neddylation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	1	27

External Links

No external refs found!