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  5. AT5G58900

AT5G58900


Description : Homeodomain-like transcriptional regulator


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000498 (LandPlants) Phylogenetic Tree(s): OG_05_0000498_tree ,
OG_06_0000376 (SeedPlants) Phylogenetic Tree(s): OG_06_0000376_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G58900
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AT3G10590 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT4G36570 ATRL3, RL3 RAD-like 3 0.02 Archaeplastida
GSVIVT01022310001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028262001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_05002 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Gb_15334 No alias transcription factor (MYB-related) 0.07 Archaeplastida
Gb_28483 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os01g09280.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
LOC_Os01g34060.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os04g27410.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os05g50340.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os05g50350.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os10g41260.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
MA_867875g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Pp3c15_23090V3.1 No alias myb-like transcription factor family protein 0.02 Archaeplastida
Pp3c4_17230V3.1 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
Smo84280 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc02g085145.1.1 No alias transcription factor (MYB-related) 0.1 Archaeplastida
Solyc03g119740.3.1 No alias transcription factor (MYB-related) 0.07 Archaeplastida
Solyc04g008870.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc08g065380.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e016939_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e028729_P001 No alias transcription factor (MYB-related) 0.06 Archaeplastida
Zm00001e031738_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0010029 regulation of seed germination IEP Neighborhood
MF GO:0010427 abscisic acid binding IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
MF GO:0019840 isoprenoid binding IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0033293 monocarboxylic acid binding IEP Neighborhood
MF GO:0042562 hormone binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
MF GO:0043178 alcohol binding IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0080163 regulation of protein serine/threonine phosphatase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1900140 regulation of seedling development IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 142 186
No external refs found!