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Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 577.0)
Gene families : OG0109706 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0093743 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0074735 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_68718g0020 | |
| Cluster | HCCA: Cluster_197 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0008033 | tRNA processing | IEP | Neighborhood |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Neighborhood |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Neighborhood |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032867 | DYW_dom | 804 | 862 |
| IPR002885 | Pentatricopeptide_repeat | 471 | 494 |
| IPR002885 | Pentatricopeptide_repeat | 85 | 110 |
| IPR002885 | Pentatricopeptide_repeat | 346 | 376 |
| IPR002885 | Pentatricopeptide_repeat | 284 | 310 |
| IPR002885 | Pentatricopeptide_repeat | 705 | 729 |
| IPR002885 | Pentatricopeptide_repeat | 377 | 406 |
| IPR002885 | Pentatricopeptide_repeat | 501 | 527 |
| IPR002885 | Pentatricopeptide_repeat | 439 | 464 |
| IPR002885 | Pentatricopeptide_repeat | 409 | 437 |
| IPR002885 | Pentatricopeptide_repeat | 211 | 259 |
| IPR002885 | Pentatricopeptide_repeat | 111 | 158 |
| IPR002885 | Pentatricopeptide_repeat | 630 | 678 |
| IPR002885 | Pentatricopeptide_repeat | 530 | 574 |
| IPR002885 | Pentatricopeptide_repeat | 311 | 341 |
| No external refs found! |