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  5. MA_693782g0010

MA_693782g0010


Description : component HYL1 of DCL1-HYL1 miRNA biogenesis complex


Gene families : OG0000434 (Archaeplastida) Phylogenetic Tree(s): OG0000434_tree ,
OG_05_0023596 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0018004 (SeedPlants) Phylogenetic Tree(s): OG_06_0018004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_693782g0010
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00199170 evm_27.TU.AmTr_v1... Double-stranded RNA-binding protein 2 OS=Oryza sativa... 0.03 Archaeplastida
AMTR_s00148p00030810 evm_27.TU.AmTr_v1... Double-stranded RNA-binding protein 6 OS=Oryza sativa... 0.02 Archaeplastida
AT2G28380 DRB2 dsRNA-binding protein 2 0.02 Archaeplastida
AT3G26932 DRB3 dsRNA-binding protein 3 0.03 Archaeplastida
GSVIVT01033035001 No alias Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os10g33970.1 No alias Double-stranded RNA-binding protein 6 OS=Oryza sativa... 0.02 Archaeplastida
MA_916653g0010 No alias Double-stranded RNA-binding protein 1 OS=Arabidopsis... 0.07 Archaeplastida
MA_98180g0020 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc01g009190.3.1 No alias Double-stranded RNA-binding protein 1 OS=Oryza sativa... 0.04 Archaeplastida
Zm00001e040435_P001 No alias Double-stranded RNA-binding protein 2 OS=Oryza sativa... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 8 73
No external refs found!