AT5G60410 (SIZ1, ATSIZ1)


Aliases : SIZ1, ATSIZ1

Description : DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain


Gene families : OG0001463 (Archaeplastida) Phylogenetic Tree(s): OG0001463_tree ,
OG_05_0002028 (LandPlants) Phylogenetic Tree(s): OG_05_0002028_tree ,
OG_06_0002564 (SeedPlants) Phylogenetic Tree(s): OG_06_0002564_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G60410
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00108p00092680 evm_27.TU.AmTr_v1... Protein degradation.peptide... 0.02 Archaeplastida
GSVIVT01025151001 No alias Protein degradation.peptide... 0.08 Archaeplastida
Gb_29862 No alias SUMO E3 ligase (SIZ1) 0.04 Archaeplastida
LOC_Os03g50980.1 No alias SUMO E3 ligase (SIZ1) 0.02 Archaeplastida
LOC_Os05g03430.1 No alias SUMO E3 ligase (SIZ1) 0.07 Archaeplastida
MA_10436942g0020 No alias SUMO E3 ligase (SIZ1) 0.06 Archaeplastida
MA_83870g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp6g08590.1 No alias SUMO E3 ligase (SIZ1) 0.02 Archaeplastida
Pp3c8_11400V3.1 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.02 Archaeplastida
Solyc11g069160.3.1 No alias SUMO E3 ligase (SIZ1) 0.07 Archaeplastida
Zm00001e027582_P001 No alias SUMO E3 ligase (SIZ1) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009414 response to water deprivation IMP Interproscan
BP GO:0009553 embryo sac development IMP Interproscan
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IMP Interproscan
BP GO:0009870 defense response signaling pathway, resistance gene-dependent IMP Interproscan
BP GO:0009910 negative regulation of flower development IMP Interproscan
BP GO:0010113 negative regulation of systemic acquired resistance IMP Interproscan
BP GO:0010183 pollen tube guidance IMP Interproscan
BP GO:0010247 detection of phosphate ion IDA Interproscan
BP GO:0010286 heat acclimation IMP Interproscan
BP GO:0010337 regulation of salicylic acid metabolic process IMP Interproscan
BP GO:0016036 cellular response to phosphate starvation IMP Interproscan
BP GO:0016049 cell growth IMP Interproscan
BP GO:0016925 protein sumoylation IDA Interproscan
MF GO:0019789 SUMO transferase activity IDA Interproscan
MF GO:0019789 SUMO transferase activity IMP Interproscan
BP GO:0040008 regulation of growth IMP Interproscan
BP GO:0048481 plant ovule development IMP Interproscan
BP GO:0048589 developmental growth IMP Interproscan
BP GO:0050826 response to freezing IMP Interproscan
BP GO:0051301 cell division IMP Interproscan
BP GO:0090352 regulation of nitrate assimilation IMP Interproscan
BP GO:2000070 regulation of response to water deprivation IMP Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
CC GO:0000145 exocyst IEP Neighborhood
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0001653 peptide receptor activity IEP Neighborhood
BP GO:0001676 long-chain fatty acid metabolic process IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0004383 guanylate cyclase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004630 phospholipase D activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004694 eukaryotic translation initiation factor 2alpha kinase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Neighborhood
CC GO:0005778 peroxisomal membrane IEP Neighborhood
CC GO:0005884 actin filament IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006379 mRNA cleavage IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006521 regulation of cellular amino acid metabolic process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0006955 immune response IEP Neighborhood
BP GO:0007166 cell surface receptor signaling pathway IEP Neighborhood
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP Neighborhood
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Neighborhood
BP GO:0007602 phototransduction IEP Neighborhood
MF GO:0008022 protein C-terminus binding IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008154 actin polymerization or depolymerization IEP Neighborhood
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009585 red, far-red light phototransduction IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
BP GO:0009638 phototropism IEP Neighborhood
BP GO:0009785 blue light signaling pathway IEP Neighborhood
BP GO:0009788 negative regulation of abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
BP GO:0009816 defense response to bacterium, incompatible interaction IEP Neighborhood
BP GO:0009880 embryonic pattern specification IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
MF GO:0009975 cyclase activity IEP Neighborhood
BP GO:0010030 positive regulation of seed germination IEP Neighborhood
BP GO:0010044 response to aluminum ion IEP Neighborhood
BP GO:0010048 vernalization response IEP Neighborhood
BP GO:0010098 suspensor development IEP Neighborhood
BP GO:0010191 mucilage metabolic process IEP Neighborhood
BP GO:0010192 mucilage biosynthetic process IEP Neighborhood
BP GO:0010225 response to UV-C IEP Neighborhood
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Neighborhood
BP GO:0010315 auxin efflux IEP Neighborhood
BP GO:0010374 stomatal complex development IEP Neighborhood
CC GO:0010445 nuclear dicing body IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010540 basipetal auxin transport IEP Neighborhood
BP GO:0010541 acropetal auxin transport IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010599 production of lsiRNA involved in RNA interference IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015865 purine nucleotide transport IEP Neighborhood
BP GO:0015868 purine ribonucleotide transport IEP Neighborhood
BP GO:0015916 fatty-acyl-CoA transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016849 phosphorus-oxygen lyase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0018105 peptidyl-serine phosphorylation IEP Neighborhood
BP GO:0018209 peptidyl-serine modification IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
BP GO:0030029 actin filament-based process IEP Neighborhood
BP GO:0030042 actin filament depolymerization IEP Neighborhood
MF GO:0030276 clathrin binding IEP Neighborhood
BP GO:0030522 intracellular receptor signaling pathway IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031053 primary miRNA processing IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0031903 microbody membrane IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0033238 regulation of cellular amine metabolic process IEP Neighborhood
MF GO:0033549 MAP kinase phosphatase activity IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0035279 mRNA cleavage involved in gene silencing by miRNA IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0042742 defense response to bacterium IEP Neighborhood
BP GO:0042753 positive regulation of circadian rhythm IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0043473 pigmentation IEP Neighborhood
BP GO:0043476 pigment accumulation IEP Neighborhood
BP GO:0043478 pigment accumulation in response to UV light IEP Neighborhood
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043480 pigment accumulation in tissues IEP Neighborhood
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
BP GO:0045087 innate immune response IEP Neighborhood
MF GO:0045182 translation regulator activity IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
CC GO:0046861 glyoxysomal membrane IEP Neighborhood
BP GO:0048354 mucilage biosynthetic process involved in seed coat development IEP Neighborhood
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP Neighborhood
BP GO:0048437 floral organ development IEP Neighborhood
BP GO:0048440 carpel development IEP Neighborhood
BP GO:0048527 lateral root development IEP Neighborhood
BP GO:0048528 post-embryonic root development IEP Neighborhood
BP GO:0048827 phyllome development IEP Neighborhood
BP GO:0051014 actin filament severing IEP Neighborhood
MF GO:0051015 actin filament binding IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
BP GO:0051261 protein depolymerization IEP Neighborhood
BP GO:0051503 adenine nucleotide transport IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0051764 actin crosslink formation IEP Neighborhood
BP GO:0060154 cellular process regulating host cell cycle in response to virus IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071214 cellular response to abiotic stimulus IEP Neighborhood
BP GO:0071478 cellular response to radiation IEP Neighborhood
BP GO:0071482 cellular response to light stimulus IEP Neighborhood
BP GO:0071483 cellular response to blue light IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0080050 regulation of seed development IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Neighborhood
BP GO:0090558 plant epidermis development IEP Neighborhood
BP GO:0090696 post-embryonic plant organ development IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
BP GO:0098586 cellular response to virus IEP Neighborhood
BP GO:0098795 mRNA cleavage involved in gene silencing IEP Neighborhood
BP GO:0104004 cellular response to environmental stimulus IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901337 thioester transport IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901420 negative regulation of response to alcohol IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
MF GO:1901981 phosphatidylinositol phosphate binding IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1905958 negative regulation of cellular response to alcohol IEP Neighborhood
BP GO:2000034 regulation of seed maturation IEP Neighborhood
InterPro domains Description Start Stop
IPR003034 SAP_dom 12 42
IPR004181 Znf_MIZ 359 407
No external refs found!