AT5G60530


Description : late embryogenesis abundant protein-related / LEA protein-related


Gene families : OG0000287 (Archaeplastida) Phylogenetic Tree(s): OG0000287_tree ,
OG_05_0000195 (LandPlants) Phylogenetic Tree(s): OG_05_0000195_tree ,
OG_06_0001887 (SeedPlants) Phylogenetic Tree(s): OG_06_0001887_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G60530
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00178790 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00171p00044550 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00175p00033590 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
GSVIVT01005843001 No alias No description available 0.05 Archaeplastida
Gb_08582 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_15126 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_38738 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g73700.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g73710.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g73720.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g73730.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g01680.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os05g47940.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g05360.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10428258g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10430750g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_558137g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6494080g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_6640022g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_6771381g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_74876g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_7605738g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8427244g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8955g0010 No alias no hits & (original description: none) 0.1 Archaeplastida
MA_957739g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp1g03490.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g11810.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp7g08760.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c20_18650V3.1 No alias Late embryogenesis abundant (LEA) protein-related 0.06 Archaeplastida
Pp3c23_2500V3.1 No alias Late embryogenesis abundant (LEA) protein-related 0.01 Archaeplastida
Pp3s49_30V3.1 No alias Late embryogenesis abundant (LEA) protein-related 0.04 Archaeplastida
Solyc01g107710.2.1 No alias no hits & (original description: none) 0.11 Archaeplastida
Solyc01g107720.3.1 No alias no hits & (original description: none) 0.11 Archaeplastida
Solyc02g078930.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g034130.2.1 No alias no hits & (original description: none) 0.11 Archaeplastida
Solyc11g069280.2.1 No alias no hits & (original description: none) 0.11 Archaeplastida
Solyc11g073140.2.1 No alias no hits & (original description: none) 0.11 Archaeplastida
Solyc11g073150.1.1 No alias no hits & (original description: none) 0.11 Archaeplastida
Zm00001e002062_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e008224_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e018525_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e018526_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e018527_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e021386_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e024129_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e028269_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e029686_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport RCA Interproscan
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
Type GO Term Name Evidence Source
CC GO:0000323 lytic vacuole IEP Neighborhood
MF GO:0003680 AT DNA binding IEP Neighborhood
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity IEP Neighborhood
MF GO:0004372 glycine hydroxymethyltransferase activity IEP Neighborhood
MF GO:0004536 deoxyribonuclease activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006563 L-serine metabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0008422 beta-glucosidase activity IEP Neighborhood
MF GO:0008446 GDP-mannose 4,6-dehydratase activity IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
BP GO:0009647 skotomorphogenesis IEP Neighborhood
MF GO:0009672 auxin:proton symporter activity IEP Neighborhood
BP GO:0009746 response to hexose IEP Neighborhood
BP GO:0009749 response to glucose IEP Neighborhood
BP GO:0009832 plant-type cell wall biogenesis IEP Neighborhood
BP GO:0009834 plant-type secondary cell wall biogenesis IEP Neighborhood
BP GO:0009913 epidermal cell differentiation IEP Neighborhood
CC GO:0009925 basal plasma membrane IEP Neighborhood
BP GO:0009958 positive gravitropism IEP Neighborhood
MF GO:0010329 auxin efflux transmembrane transporter activity IEP Neighborhood
BP GO:0010359 regulation of anion channel activity IEP Neighborhood
BP GO:0010453 regulation of cell fate commitment IEP Neighborhood
BP GO:0010455 positive regulation of cell fate commitment IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
MF GO:0019137 thioglucosidase activity IEP Neighborhood
BP GO:0022898 regulation of transmembrane transporter activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0030855 epithelial cell differentiation IEP Neighborhood
BP GO:0032409 regulation of transporter activity IEP Neighborhood
BP GO:0032412 regulation of ion transmembrane transporter activity IEP Neighborhood
BP GO:0034284 response to monosaccharide IEP Neighborhood
BP GO:0034762 regulation of transmembrane transport IEP Neighborhood
BP GO:0034765 regulation of ion transmembrane transport IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
MF GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity IEP Neighborhood
BP GO:0044070 regulation of anion transport IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0045165 cell fate commitment IEP Neighborhood
BP GO:0045597 positive regulation of cell differentiation IEP Neighborhood
BP GO:0046685 response to arsenic-containing substance IEP Neighborhood
MF GO:0046910 pectinesterase inhibitor activity IEP Neighborhood
BP GO:0048364 root development IEP Neighborhood
BP GO:0048443 stamen development IEP Neighborhood
BP GO:0048658 anther wall tapetum development IEP Neighborhood
BP GO:0048766 root hair initiation IEP Neighborhood
BP GO:0048829 root cap development IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
CC GO:0071944 cell periphery IEP Neighborhood
BP GO:0080144 amino acid homeostasis IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:1903959 regulation of anion transmembrane transport IEP Neighborhood
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR009646 Root_cap 372 428
No external refs found!