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  5. MA_72615g0020

MA_72615g0020


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 534.0)


Gene families : OG0013787 (Archaeplastida) Phylogenetic Tree(s): OG0013787_tree ,
OG_05_0093812 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0074808 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_72615g0020

Target Alias Description ECC score Gene Family Method Actions
MA_179801g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 449 496
IPR002885 Pentatricopeptide_repeat 130 178
IPR002885 Pentatricopeptide_repeat 550 598
IPR002885 Pentatricopeptide_repeat 297 325
IPR002885 Pentatricopeptide_repeat 327 357
IPR002885 Pentatricopeptide_repeat 624 649
IPR002885 Pentatricopeptide_repeat 39 61
IPR002885 Pentatricopeptide_repeat 265 294
IPR002885 Pentatricopeptide_repeat 389 418
IPR002885 Pentatricopeptide_repeat 206 233
IPR002885 Pentatricopeptide_repeat 358 387
IPR002885 Pentatricopeptide_repeat 234 264
No external refs found!