- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : serine hydroxymethyltransferase
Gene families : OG0000522 (Archaeplastida) Phylogenetic Tree(s): OG0000522_tree ,
OG_05_0009752 (LandPlants) Phylogenetic Tree(s): OG_05_0009752_tree ,
OG_06_0011949 (SeedPlants) Phylogenetic Tree(s): OG_06_0011949_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_730617g0010 | |
| Cluster | HCCA: Cluster_197 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00001130.31 | No alias | Enzyme classification.EC_2 transferases.EC_2.1... | 0.01 | Archaeplastida | |
| Mp2g07660.1 | No alias | serine hydroxymethyltransferase | 0.03 | Archaeplastida | |
| Solyc12g095930.2.1 | No alias | serine hydroxymethyltransferase | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0003860 | 3-hydroxyisobutyryl-CoA hydrolase activity | IEP | Neighborhood |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Neighborhood |
| MF | GO:0004347 | glucose-6-phosphate isomerase activity | IEP | Neighborhood |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006006 | glucose metabolic process | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Neighborhood |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Neighborhood |
| BP | GO:0006094 | gluconeogenesis | IEP | Neighborhood |
| BP | GO:0006096 | glycolytic process | IEP | Neighborhood |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006553 | lysine metabolic process | IEP | Neighborhood |
| BP | GO:0006733 | oxidoreduction coenzyme metabolic process | IEP | Neighborhood |
| BP | GO:0006754 | ATP biosynthetic process | IEP | Neighborhood |
| BP | GO:0006757 | ATP generation from ADP | IEP | Neighborhood |
| MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009085 | lysine biosynthetic process | IEP | Neighborhood |
| BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Neighborhood |
| BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009166 | nucleotide catabolic process | IEP | Neighborhood |
| BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Neighborhood |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Neighborhood |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Neighborhood |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Neighborhood |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| MF | GO:0016289 | CoA hydrolase activity | IEP | Neighborhood |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Neighborhood |
| MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Neighborhood |
| MF | GO:0016790 | thiolester hydrolase activity | IEP | Neighborhood |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Neighborhood |
| MF | GO:0016843 | amine-lyase activity | IEP | Neighborhood |
| MF | GO:0016844 | strictosidine synthase activity | IEP | Neighborhood |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Neighborhood |
| BP | GO:0019318 | hexose metabolic process | IEP | Neighborhood |
| BP | GO:0019319 | hexose biosynthetic process | IEP | Neighborhood |
| BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| CC | GO:0019867 | outer membrane | IEP | Neighborhood |
| BP | GO:0034404 | nucleobase-containing small molecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Neighborhood |
| BP | GO:0042866 | pyruvate biosynthetic process | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Neighborhood |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Neighborhood |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0046031 | ADP metabolic process | IEP | Neighborhood |
| BP | GO:0046034 | ATP metabolic process | IEP | Neighborhood |
| BP | GO:0046364 | monosaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0046434 | organophosphate catabolic process | IEP | Neighborhood |
| BP | GO:0046451 | diaminopimelate metabolic process | IEP | Neighborhood |
| BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | Neighborhood |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901292 | nucleoside phosphate catabolic process | IEP | Neighborhood |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |