AT5G61130 (PDCB1)


Aliases : PDCB1

Description : plasmodesmata callose-binding protein 1


Gene families : OG0000145 (Archaeplastida) Phylogenetic Tree(s): OG0000145_tree ,
OG_05_0000072 (LandPlants) Phylogenetic Tree(s): OG_05_0000072_tree ,
OG_06_0000086 (SeedPlants) Phylogenetic Tree(s): OG_06_0000086_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G61130
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00250830 evm_27.TU.AmTr_v1... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00021p00163410 evm_27.TU.AmTr_v1... PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00045p00081920 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AMTR_s00086p00121550 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00092p00035570 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01007873001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.08 Archaeplastida
GSVIVT01014068001 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea 0.04 Archaeplastida
GSVIVT01015894001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01021583001 No alias Pentatricopeptide repeat-containing protein At2g17525,... 0.07 Archaeplastida
GSVIVT01025431001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
GSVIVT01031317001 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_00481 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.06 Archaeplastida
Gb_14999 No alias Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os07g40940.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os10g20650.1 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.03 Archaeplastida
MA_158566g0010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 Archaeplastida
MA_210389g0010 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.09 Archaeplastida
MA_5039622g0010 No alias No annotation 0.07 Archaeplastida
MA_9796357g0010 No alias Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c21_14040V3.1 No alias O-Glycosyl hydrolases family 17 protein 0.03 Archaeplastida
Pp3c22_6790V3.1 No alias O-Glycosyl hydrolases family 17 protein 0.03 Archaeplastida
Solyc01g005830.4.1 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.07 Archaeplastida
Solyc01g010310.4.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 Archaeplastida
Solyc02g071200.4.1 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.04 Archaeplastida
Solyc03g115200.3.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 Archaeplastida
Solyc04g058080.3.1 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.06 Archaeplastida
Solyc05g012380.3.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.11 Archaeplastida
Solyc05g016390.4.1 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.08 Archaeplastida
Solyc07g056310.3.1 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.04 Archaeplastida
Solyc09g091920.3.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.1 Archaeplastida
Zm00001e005720_P001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e006250_P002 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e009160_P001 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.13 Archaeplastida
Zm00001e020392_P001 No alias Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e022608_P001 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e027936_P001 No alias Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e032121_P001 No alias Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e037118_P002 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.07 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process RCA Interproscan
MF GO:0001872 (1->3)-beta-D-glucan binding IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008652 cellular amino acid biosynthetic process RCA Interproscan
BP GO:0009069 serine family amino acid metabolic process RCA Interproscan
CC GO:0009505 plant-type cell wall IDA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
BP GO:0009664 plant-type cell wall organization RCA Interproscan
BP GO:0009740 gibberellic acid mediated signaling pathway RCA Interproscan
BP GO:0010162 seed dormancy process RCA Interproscan
MF GO:0030247 polysaccharide binding IDA Interproscan
CC GO:0031225 anchored component of membrane TAS Interproscan
BP GO:0042545 cell wall modification RCA Interproscan
CC GO:0046658 anchored component of plasma membrane IDA Interproscan
BP GO:0052543 callose deposition in cell wall IMP Interproscan
Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000280 nuclear division IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
CC GO:0000790 nuclear chromatin IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
BP GO:0001708 cell fate specification IEP Neighborhood
BP GO:0003002 regionalization IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005971 ribonucleoside-diphosphate reductase complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006342 chromatin silencing IEP Neighborhood
BP GO:0006346 methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0006997 nucleus organization IEP Neighborhood
BP GO:0007000 nucleolus organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
BP GO:0007166 cell surface receptor signaling pathway IEP Neighborhood
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP Neighborhood
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Neighborhood
BP GO:0007267 cell-cell signaling IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0008356 asymmetric cell division IEP Neighborhood
BP GO:0008361 regulation of cell size IEP Neighborhood
BP GO:0009200 deoxyribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009202 deoxyribonucleoside triphosphate biosynthetic process IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009616 virus induced gene silencing IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009799 specification of symmetry IEP Neighborhood
BP GO:0009855 determination of bilateral symmetry IEP Neighborhood
BP GO:0009887 animal organ morphogenesis IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009914 hormone transport IEP Neighborhood
BP GO:0009926 auxin polar transport IEP Neighborhood
BP GO:0009957 epidermal cell fate specification IEP Neighborhood
BP GO:0010015 root morphogenesis IEP Neighborhood
BP GO:0010016 shoot system morphogenesis IEP Neighborhood
BP GO:0010051 xylem and phloem pattern formation IEP Neighborhood
BP GO:0010052 guard cell differentiation IEP Neighborhood
BP GO:0010073 meristem maintenance IEP Neighborhood
BP GO:0010075 regulation of meristem growth IEP Neighborhood
BP GO:0010103 stomatal complex morphogenesis IEP Neighborhood
BP GO:0010148 transpiration IEP Neighborhood
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP Neighborhood
BP GO:0010374 stomatal complex development IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016246 RNA interference IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016441 posttranscriptional gene silencing IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
MF GO:0019199 transmembrane receptor protein kinase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0023052 signaling IEP Neighborhood
BP GO:0030155 regulation of cell adhesion IEP Neighborhood
BP GO:0030422 production of siRNA involved in RNA interference IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031048 chromatin silencing by small RNA IEP Neighborhood
BP GO:0031050 dsRNA fragmentation IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0032411 positive regulation of transporter activity IEP Neighborhood
BP GO:0032414 positive regulation of ion transmembrane transporter activity IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0034764 positive regulation of transmembrane transport IEP Neighborhood
BP GO:0034767 positive regulation of ion transmembrane transport IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0035194 posttranscriptional gene silencing by RNA IEP Neighborhood
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0035821 modification of morphology or physiology of other organism IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0040029 regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043270 positive regulation of ion transport IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044003 modification by symbiont of host morphology or physiology IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
BP GO:0044770 cell cycle phase transition IEP Neighborhood
BP GO:0044772 mitotic cell cycle phase transition IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0044843 cell cycle G1/S phase transition IEP Neighborhood
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0048281 inflorescence morphogenesis IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
BP GO:0048316 seed development IEP Neighborhood
BP GO:0048439 flower morphogenesis IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048638 regulation of developmental growth IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048653 anther development IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051050 positive regulation of transport IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051253 negative regulation of RNA metabolic process IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0051567 histone H3-K9 methylation IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
BP GO:0051701 interaction with host IEP Neighborhood
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052018 modulation by symbiont of RNA levels in host IEP Neighborhood
BP GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0060918 auxin transport IEP Neighborhood
BP GO:0061647 histone H3-K9 modification IEP Neighborhood
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0071588 hydrogen peroxide mediated signaling pathway IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0090558 plant epidermis development IEP Neighborhood
BP GO:0090626 plant epidermis morphogenesis IEP Neighborhood
BP GO:0090698 post-embryonic plant morphogenesis IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0098586 cellular response to virus IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement IEP Neighborhood
BP GO:1901528 hydrogen peroxide mediated signaling pathway involved in stomatal movement IEP Neighborhood
BP GO:1901529 positive regulation of anion channel activity IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903793 positive regulation of anion transport IEP Neighborhood
BP GO:1903961 positive regulation of anion transmembrane transport IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000027 regulation of animal organ morphogenesis IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012946 X8 20 91
No external refs found!