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Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 540.0)
Gene families : OG0009320 (Archaeplastida) Phylogenetic Tree(s): OG0009320_tree ,
OG_05_0093836 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0074833 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_733561g0010 | |
| Cluster | HCCA: Cluster_308 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01034707001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.07 | Archaeplastida | |
| Gb_02544 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.12 | Archaeplastida | |
| Gb_33727 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.08 | Archaeplastida | |
| MA_9392719g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | Archaeplastida | |
| Smo114102 | No alias | Pentatricopeptide repeat-containing protein At5g27110... | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 581 | 627 |
| IPR002885 | Pentatricopeptide_repeat | 347 | 395 |
| IPR002885 | Pentatricopeptide_repeat | 480 | 526 |
| IPR002885 | Pentatricopeptide_repeat | 216 | 263 |
| IPR002885 | Pentatricopeptide_repeat | 22 | 69 |
| IPR002885 | Pentatricopeptide_repeat | 97 | 123 |
| IPR002885 | Pentatricopeptide_repeat | 125 | 154 |
| IPR002885 | Pentatricopeptide_repeat | 724 | 750 |
| IPR002885 | Pentatricopeptide_repeat | 422 | 445 |
| IPR002885 | Pentatricopeptide_repeat | 291 | 313 |
| IPR002885 | Pentatricopeptide_repeat | 319 | 345 |
| IPR002885 | Pentatricopeptide_repeat | 184 | 213 |
| IPR002885 | Pentatricopeptide_repeat | 449 | 477 |
| No external refs found! |