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  5. MA_7379g0010

MA_7379g0010


Description : Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana (sp|q9s7f4|pp206_arath : 506.0)


Gene families : OG0011485 (Archaeplastida) Phylogenetic Tree(s): OG0011485_tree ,
OG_05_0007382 (LandPlants) Phylogenetic Tree(s): OG_05_0007382_tree ,
OG_06_0002470 (SeedPlants) Phylogenetic Tree(s): OG_06_0002470_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_7379g0010
Cluster HCCA: Cluster_308

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00261060 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g49710... 0.05 Archaeplastida
AMTR_s00137p00067410 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g49710... 0.02 Archaeplastida
Gb_31795 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.06 Archaeplastida
Solyc01g102690.4.1 No alias Pentatricopeptide repeat-containing protein At3g49710... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 267 312
IPR002885 Pentatricopeptide_repeat 134 181
IPR002885 Pentatricopeptide_repeat 465 512
IPR002885 Pentatricopeptide_repeat 366 412
IPR002885 Pentatricopeptide_repeat 549 596
IPR002885 Pentatricopeptide_repeat 340 365
IPR002885 Pentatricopeptide_repeat 237 263
IPR002885 Pentatricopeptide_repeat 439 462
IPR002885 Pentatricopeptide_repeat 209 236
IPR032867 DYW_dom 723 778
IPR002885 Pentatricopeptide_repeat 99 131
No external refs found!