AT5G61850 (LFY, LFY3)

Aliases : LFY, LFY3

Description : floral meristem identity control protein LEAFY (LFY)

Gene families : OG0006256 (Archaeplastida) Phylogenetic Tree(s): OG0006256_tree ,
OG_05_0005303 (LandPlants) Phylogenetic Tree(s): OG_05_0005303_tree ,
OG_06_0009895 (SeedPlants) Phylogenetic Tree(s): OG_06_0009895_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G61850
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
Gb_05859	No alias	transcription factor (LFY)	0.02	Archaeplastida
LOC_Os04g51000.1	No alias	transcription factor (LFY)	0.05	Archaeplastida
Zm00001e007066_P002	No alias	transcription factor (LFY)	0.04	Archaeplastida
Zm00001e041565_P001	No alias	transcription factor (LFY)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003682	chromatin binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IDA	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	TAS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005634	nucleus	TAS	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009740	gibberellic acid mediated signaling pathway	TAS	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009908	flower development	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010022	meristem determinacy	None	Extended
BP	GO:0010074	maintenance of meristem identity	None	Extended
BP	GO:0010077	maintenance of inflorescence meristem identity	IGI	Interproscan
BP	GO:0010476	gibberellin mediated signaling pathway	None	Extended
BP	GO:0010582	floral meristem determinacy	IGI	Interproscan
BP	GO:0019827	stem cell population maintenance	None	Extended
BP	GO:0022414	reproductive process	None	Extended
MF	GO:0031490	chromatin DNA binding	IDA	Interproscan
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IDA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IDA	Interproscan
MF	GO:0043621	protein self-association	IPI	Interproscan
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0048367	shoot system development	None	Extended
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048731	system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0090567	reproductive shoot system development	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098727	maintenance of cell number	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006354	DNA-templated transcription, elongation	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0007275	multicellular organism development	IEP	Neighborhood
BP	GO:0007389	pattern specification process	IEP	Neighborhood
MF	GO:0008134	transcription factor binding	IEP	Neighborhood
BP	GO:0008283	cell proliferation	IEP	Neighborhood
BP	GO:0009410	response to xenobiotic stimulus	IEP	Neighborhood
BP	GO:0009648	photoperiodism	IEP	Neighborhood
BP	GO:0009790	embryo development	IEP	Neighborhood
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Neighborhood
BP	GO:0009798	axis specification	IEP	Neighborhood
BP	GO:0009850	auxin metabolic process	IEP	Neighborhood
BP	GO:0009851	auxin biosynthetic process	IEP	Neighborhood
BP	GO:0009880	embryonic pattern specification	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009909	regulation of flower development	IEP	Neighborhood
BP	GO:0009911	positive regulation of flower development	IEP	Neighborhood
BP	GO:0009933	meristem structural organization	IEP	Neighborhood
BP	GO:0009943	adaxial/abaxial axis specification	IEP	Neighborhood
BP	GO:0009947	centrolateral axis specification	IEP	Neighborhood
BP	GO:0010229	inflorescence development	IEP	Neighborhood
BP	GO:0010321	regulation of vegetative phase change	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010865	stipule development	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Neighborhood
BP	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0042254	ribosome biogenesis	IEP	Neighborhood
BP	GO:0042752	regulation of circadian rhythm	IEP	Neighborhood
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0048366	leaf development	IEP	Neighborhood
BP	GO:0048513	animal organ development	IEP	Neighborhood
BP	GO:0048532	anatomical structure arrangement	IEP	Neighborhood
BP	GO:0048573	photoperiodism, flowering	IEP	Neighborhood
BP	GO:0048580	regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0048582	positive regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0048825	cotyledon development	IEP	Neighborhood
BP	GO:0048827	phyllome development	IEP	Neighborhood
BP	GO:0048831	regulation of shoot system development	IEP	Neighborhood
BP	GO:0050793	regulation of developmental process	IEP	Neighborhood
BP	GO:0051094	positive regulation of developmental process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051239	regulation of multicellular organismal process	IEP	Neighborhood
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
BP	GO:0099402	plant organ development	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000024	regulation of leaf development	IEP	Neighborhood
BP	GO:2000026	regulation of multicellular organismal development	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2000241	regulation of reproductive process	IEP	Neighborhood
BP	GO:2000243	positive regulation of reproductive process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR035079	LFY_SAM	45	123
IPR035209	FLO/LFY_C	227	389

External Links

No external refs found!

AT5G61850 (LFY, LFY3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation