MA_7581523g0010


Description : component RPL34 of LSU proteome component


Gene families : OG0001700 (Archaeplastida) Phylogenetic Tree(s): OG0001700_tree ,
OG_05_0001610 (LandPlants) Phylogenetic Tree(s): OG_05_0001610_tree ,
OG_06_0002125 (SeedPlants) Phylogenetic Tree(s): OG_06_0002125_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_7581523g0010
Cluster HCCA: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00260490 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
AMTR_s00010p00260730 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 Archaeplastida
AT1G26880 No alias Ribosomal protein L34e superfamily protein 0.21 Archaeplastida
AT1G69620 RPL34 ribosomal protein L34 0.23 Archaeplastida
AT3G28900 No alias Ribosomal protein L34e superfamily protein 0.22 Archaeplastida
Cpa|evm.model.tig00000632.3 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
Cre16.g661050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 Archaeplastida
GSVIVT01011419001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
GSVIVT01019985001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
Gb_36060 No alias component RPL34 of LSU proteome component 0.07 Archaeplastida
LOC_Os08g06040.1 No alias component RPL34 of LSU proteome component 0.23 Archaeplastida
LOC_Os08g33920.1 No alias component RPL34 of LSU proteome component 0.12 Archaeplastida
LOC_Os09g24690.1 No alias component RPL34 of LSU proteome component 0.21 Archaeplastida
Mp4g17040.1 No alias component RPL34 of LSU proteome component 0.2 Archaeplastida
Pp3c11_2940V3.1 No alias Ribosomal protein L34e superfamily protein 0.15 Archaeplastida
Pp3c11_3090V3.1 No alias Ribosomal protein L34e superfamily protein 0.05 Archaeplastida
Pp3c1_1800V3.1 No alias Ribosomal protein L34e superfamily protein 0.11 Archaeplastida
Pp3c25_11980V3.1 No alias Ribosomal protein L34e superfamily protein 0.17 Archaeplastida
Pp3c2_34570V3.1 No alias Ribosomal protein L34e superfamily protein 0.11 Archaeplastida
Pp3c7_21380V3.1 No alias Ribosomal protein L34e superfamily protein 0.14 Archaeplastida
Smo113433 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 Archaeplastida
Solyc02g087930.3.1 No alias component RPL34 of LSU proteome component 0.02 Archaeplastida
Solyc05g007560.3.1 No alias component RPL34 of LSU proteome component 0.18 Archaeplastida
Solyc06g069860.4.1 No alias component RPL34 of LSU proteome component 0.2 Archaeplastida
Zm00001e004116_P001 No alias component RPL34 of LSU proteome component 0.15 Archaeplastida
Zm00001e021733_P002 No alias component RPL34 of LSU proteome component 0.19 Archaeplastida
Zm00001e034114_P001 No alias component RPL34 of LSU proteome component 0.24 Archaeplastida
Zm00001e040229_P001 No alias component RPL34 of LSU proteome component 0.2 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0018196 peptidyl-asparagine modification IEP Neighborhood
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR008195 Ribosomal_L34Ae 1 96
No external refs found!