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  5. MA_767141g0010

MA_767141g0010


Description : E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana (sp|f4kcc2|prt6_arath : 249.0)


Gene families : OG0002611 (Archaeplastida) Phylogenetic Tree(s): OG0002611_tree ,
OG_05_0004097 (LandPlants) Phylogenetic Tree(s): OG_05_0004097_tree ,
OG_06_0006106 (SeedPlants) Phylogenetic Tree(s): OG_06_0006106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_767141g0010
Cluster HCCA: Cluster_382

Target Alias Description ECC score Gene Family Method Actions
AT5G02310 PRT6 proteolysis 6 0.1 Archaeplastida
Cpa|evm.model.tig00001107.13 No alias Protein degradation.N-end rule pathway of targeted... 0.01 Archaeplastida
Cre02.g089237 No alias Protein degradation.N-end rule pathway of targeted... 0.02 Archaeplastida
GSVIVT01034167001 No alias E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana 0.14 Archaeplastida
GSVIVT01034169001 No alias Protein degradation.N-end rule pathway of targeted... 0.09 Archaeplastida
Gb_11947 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.04 Archaeplastida
LOC_Os01g05500.2 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.06 Archaeplastida
MA_10429118g0010 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.11 Archaeplastida
MA_387g0010 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.16 Archaeplastida
Mp7g16320.1 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.07 Archaeplastida
Pp3c10_20380V3.1 No alias proteolysis 6 0.05 Archaeplastida
Pp3c3_24510V3.1 No alias proteolysis 6 0.02 Archaeplastida
Pp3c9_4700V3.1 No alias proteolysis 6 0.05 Archaeplastida
Smo438209 No alias Protein degradation.N-end rule pathway of targeted... 0.06 Archaeplastida
Zm00001e016914_P004 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!