MA_76949g0010

Description : E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana (sp|q94ak4|rzf1_arath : 148.0)

Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0000046 (LandPlants) Phylogenetic Tree(s): OG_05_0000046_tree ,
OG_06_0001181 (SeedPlants) Phylogenetic Tree(s): OG_06_0001181_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_76949g0010
Cluster	HCCA: Cluster_386

Target	Alias	Description	ECC score	Gene Family Method
AT1G18770	No alias	RING/U-box superfamily protein	0.02	Archaeplastida
GSVIVT01008897001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.05	Archaeplastida
GSVIVT01020764001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.03	Archaeplastida
GSVIVT01022971001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.02	Archaeplastida
MA_413614g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_78640g0010	No alias	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum...	0.11	Archaeplastida
Mp7g04520.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc07g055330.3.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc09g074460.3.1	No alias	E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Zm00001e009715_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e038199_P001	No alias	Probable E3 ubiquitin-protein ligase RHC1A...	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	Interproscan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	171	213

External Links

No external refs found!