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  5. MA_771696g0010

MA_771696g0010


Description : Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana (sp|q9lnu6|ppr53_arath : 509.0)


Gene families : OG0023137 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0029165 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0027627 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_771696g0010
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Gb_39962 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.06 Archaeplastida
Zm00001e021026_P001 No alias Pentatricopeptide repeat-containing protein At1g09190... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 225 251
IPR002885 Pentatricopeptide_repeat 195 223
IPR002885 Pentatricopeptide_repeat 535 558
IPR002885 Pentatricopeptide_repeat 358 405
IPR002885 Pentatricopeptide_repeat 459 507
IPR002885 Pentatricopeptide_repeat 257 304
IPR032867 DYW_dom 633 687
No external refs found!