Description : histone (H2B)
Gene families : OG0000186 (Archaeplastida) Phylogenetic Tree(s): OG0000186_tree ,
OG_05_0000249 (LandPlants) Phylogenetic Tree(s): OG_05_0000249_tree ,
OG_06_0000187 (SeedPlants) Phylogenetic Tree(s): OG_06_0000187_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_77198g0010 | |
Cluster | HCCA: Cluster_182 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00012p00085300 | evm_27.TU.AmTr_v1... | Chromatin organisation.histones.H2B-type histone | 0.03 | Archaeplastida | |
AMTR_s00012p00085960 | evm_27.TU.AmTr_v1... | Chromatin organisation.histones.H2B-type histone | 0.03 | Archaeplastida | |
AT3G46030 | HTB11 | Histone superfamily protein | 0.04 | Archaeplastida | |
AT5G22880 | HTB2, H2B | histone B2 | 0.03 | Archaeplastida | |
AT5G59910 | HTB4 | Histone superfamily protein | 0.02 | Archaeplastida | |
Cre06.g264800 | No alias | Chromatin organisation.histones.H2B-type histone | 0.03 | Archaeplastida | |
Cre06.g264900 | No alias | Chromatin organisation.histones.H2B-type histone | 0.04 | Archaeplastida | |
Cre06.g266750 | No alias | Chromatin organisation.histones.H2B-type histone | 0.03 | Archaeplastida | |
Cre06.g271376 | No alias | Chromatin organisation.histones.H2B-type histone | 0.02 | Archaeplastida | |
Cre06.g273850 | No alias | Chromatin organisation.histones.H2B-type histone | 0.03 | Archaeplastida | |
Cre06.g274250 | No alias | Chromatin organisation.histones.H2B-type histone | 0.04 | Archaeplastida | |
Cre06.g275800 | No alias | Chromatin organisation.histones.H2B-type histone | 0.03 | Archaeplastida | |
Cre06.g276550 | No alias | Chromatin organisation.histones.H2B-type histone | 0.04 | Archaeplastida | |
Cre06.g276900 | No alias | Chromatin organisation.histones.H2B-type histone | 0.03 | Archaeplastida | |
Cre12.g504550 | No alias | Chromatin organisation.histones.H2B-type histone | 0.03 | Archaeplastida | |
Cre12.g504700 | No alias | Chromatin organisation.histones.H2B-type histone | 0.04 | Archaeplastida | |
Cre12.g505600 | No alias | Chromatin organisation.histones.H2B-type histone | 0.03 | Archaeplastida | |
Cre12.g506200 | No alias | Chromatin organisation.histones.H2B-type histone | 0.04 | Archaeplastida | |
Cre13.g570050 | No alias | Chromatin organisation.histones.H2B-type histone | 0.04 | Archaeplastida | |
Cre17.g709150 | No alias | Chromatin organisation.histones.H2B-type histone | 0.04 | Archaeplastida | |
Cre17.g710450 | No alias | Chromatin organisation.histones.H2B-type histone | 0.04 | Archaeplastida | |
Cre17.g711750 | No alias | Chromatin organisation.histones.H2B-type histone | 0.04 | Archaeplastida | |
Cre17.g713450 | No alias | Chromatin organisation.histones.H2B-type histone | 0.02 | Archaeplastida | |
Cre17.g714050 | No alias | Chromatin organisation.histones.H2B-type histone | 0.04 | Archaeplastida | |
GSVIVT01016164001 | No alias | Chromatin organisation.histones.H2B-type histone | 0.02 | Archaeplastida | |
Gb_02245 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Gb_12082 | No alias | histone (H2B) | 0.03 | Archaeplastida | |
Gb_12096 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Gb_26315 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
Gb_32754 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
LOC_Os01g05630.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
LOC_Os01g05900.1 | No alias | histone (H2B) | 0.03 | Archaeplastida | |
LOC_Os01g05970.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
LOC_Os01g06010.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
LOC_Os03g17084.1 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
LOC_Os05g49860.1 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
LOC_Os08g38300.1 | No alias | histone (H2B) | 0.03 | Archaeplastida | |
MA_10428006g0010 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
MA_10435143g0010 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
Mp4g13450.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Mp6g04070.1 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
Pp3c12_7610V3.1 | No alias | Histone superfamily protein | 0.05 | Archaeplastida | |
Pp3c13_23540V3.1 | No alias | Histone superfamily protein | 0.02 | Archaeplastida | |
Pp3c17_15780V3.1 | No alias | Histone superfamily protein | 0.04 | Archaeplastida | |
Smo182308 | No alias | Chromatin organisation.histones.H2B-type histone | 0.04 | Archaeplastida | |
Solyc02g038690.1.1 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
Solyc05g055440.1.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Solyc06g074780.1.1 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Solyc06g074790.2.1 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
Solyc06g075800.1.1 | No alias | histone (H2B) | 0.03 | Archaeplastida | |
Solyc11g007920.1.1 | No alias | histone (H2B) | 0.03 | Archaeplastida | |
Solyc11g007930.1.1 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
Solyc11g066430.2.1 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
Zm00001e004028_P001 | No alias | histone (H2B) | 0.03 | Archaeplastida | |
Zm00001e010906_P002 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Zm00001e016882_P001 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
Zm00001e020484_P002 | No alias | histone (H2B) | 0.03 | Archaeplastida | |
Zm00001e022201_P001 | No alias | histone (H2B) | 0.03 | Archaeplastida | |
Zm00001e023342_P001 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
Zm00001e027803_P001 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
Zm00001e038466_P001 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Zm00001e039057_P002 | No alias | histone (H2B) | 0.02 | Archaeplastida | |
Zm00001e041296_P001 | No alias | histone (H2B) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | Interproscan |
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Neighborhood |
MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
MF | GO:0004784 | superoxide dismutase activity | IEP | Neighborhood |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
BP | GO:0006801 | superoxide metabolic process | IEP | Neighborhood |
CC | GO:0016592 | mediator complex | IEP | Neighborhood |
MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Neighborhood |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Neighborhood |
BP | GO:0018208 | peptidyl-proline modification | IEP | Neighborhood |
CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007125 | Histone_H2A/H2B/H3 | 19 | 138 |
No external refs found! |