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  5. MA_77707g0010

MA_77707g0010


Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana (sp|q9sit7|pp151_arath : 544.0)


Gene families : OG0005160 (Archaeplastida) Phylogenetic Tree(s): OG0005160_tree ,
OG_05_0015797 (LandPlants) Phylogenetic Tree(s): OG_05_0015797_tree ,
OG_06_0015533 (SeedPlants) Phylogenetic Tree(s): OG_06_0015533_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_77707g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00179320 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g66631... 0.02 Archaeplastida
GSVIVT01019040001 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.17 Archaeplastida
Gb_36347 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.05 Archaeplastida
LOC_Os01g07340.1 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.02 Archaeplastida
MA_89328g0010 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.03 Archaeplastida
Solyc02g065510.1.1 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.03 Archaeplastida
Zm00001e016802_P001 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 547 603
IPR002885 Pentatricopeptide_repeat 216 242
IPR002885 Pentatricopeptide_repeat 514 543
IPR002885 Pentatricopeptide_repeat 448 472
IPR002885 Pentatricopeptide_repeat 43 71
IPR002885 Pentatricopeptide_repeat 141 188
IPR002885 Pentatricopeptide_repeat 374 420
IPR002885 Pentatricopeptide_repeat 273 319
No external refs found!