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  5. MA_777619g0010

MA_777619g0010


Description : Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana (sp|q8lps6|ppr3_arath : 252.0)


Gene families : OG0000235 (Archaeplastida) Phylogenetic Tree(s): OG0000235_tree ,
OG_05_0000298 (LandPlants) Phylogenetic Tree(s): OG_05_0000298_tree ,
OG_06_0011776 (SeedPlants) Phylogenetic Tree(s): OG_06_0011776_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_777619g0010
Cluster HCCA: Cluster_313

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g35760.2 No alias Pentatricopeptide repeat-containing protein At2g20710,... 0.02 Archaeplastida
Smo413483 No alias Pentatricopeptide repeat-containing protein At1g80270,... 0.05 Archaeplastida
Zm00001e033119_P002 No alias RNA editing factor (POCO) 0.02 Archaeplastida
Zm00001e036620_P001 No alias Pentatricopeptide repeat-containing protein At1g60770... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 77 123
IPR002885 Pentatricopeptide_repeat 256 284
IPR002885 Pentatricopeptide_repeat 44 73
No external refs found!