1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G62910

AT5G62910


Description : RING/U-box superfamily protein


Gene families : OG0002851 (Archaeplastida) Phylogenetic Tree(s): OG0002851_tree ,
OG_05_0002459 (LandPlants) Phylogenetic Tree(s): OG_05_0002459_tree ,
OG_06_0003578 (SeedPlants) Phylogenetic Tree(s): OG_06_0003578_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G62910

Target Alias Description ECC score Gene Family Method Actions
MA_10436110g0020 No alias RING-C2-class E3 ligase 0.02 Archaeplastida
MpVg01180.1 No alias No annotation 0.05 Archaeplastida
Zm00001e007883_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP Neighborhood
BP GO:0000910 cytokinesis IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003917 DNA topoisomerase type I activity IEP Neighborhood
MF GO:0004034 aldose 1-epimerase activity IEP Neighborhood
MF GO:0004103 choline kinase activity IEP Neighborhood
MF GO:0004475 mannose-1-phosphate guanylyltransferase activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
MF GO:0005459 UDP-galactose transmembrane transporter activity IEP Neighborhood
MF GO:0005460 UDP-glucose transmembrane transporter activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006012 galactose metabolic process IEP Neighborhood
BP GO:0006071 glycerol metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006560 proline metabolic process IEP Neighborhood
BP GO:0006561 proline biosynthetic process IEP Neighborhood
BP GO:0006971 hypotonic response IEP Neighborhood
BP GO:0006972 hyperosmotic response IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0007112 male meiosis cytokinesis IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP Neighborhood
MF GO:0008905 mannose-phosphate guanylyltransferase activity IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
CC GO:0009368 endopeptidase Clp complex IEP Neighborhood
BP GO:0009408 response to heat IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0009590 detection of gravity IEP Neighborhood
BP GO:0009595 detection of biotic stimulus IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009617 response to bacterium IEP Neighborhood
BP GO:0009636 response to toxic substance IEP Neighborhood
BP GO:0009642 response to light intensity IEP Neighborhood
BP GO:0009644 response to high light intensity IEP Neighborhood
BP GO:0009696 salicylic acid metabolic process IEP Neighborhood
BP GO:0009697 salicylic acid biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009723 response to ethylene IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0009742 brassinosteroid mediated signaling pathway IEP Neighborhood
BP GO:0009753 response to jasmonic acid IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEP Neighborhood
CC GO:0009840 chloroplastic endopeptidase Clp complex IEP Neighborhood
BP GO:0009861 jasmonic acid and ethylene-dependent systemic resistance IEP Neighborhood
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009863 salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009867 jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0009868 jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0009959 negative gravitropism IEP Neighborhood
BP GO:0010031 circumnutation IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010193 response to ozone IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010374 stomatal complex development IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0015692 lead ion transport IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015850 organic hydroxy compound transport IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
MF GO:0016595 glutamate binding IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
CC GO:0016602 CCAAT-binding factor complex IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
BP GO:0017000 antibiotic biosynthetic process IEP Neighborhood
BP GO:0018958 phenol-containing compound metabolic process IEP Neighborhood
BP GO:0019400 alditol metabolic process IEP Neighborhood
BP GO:0019852 L-ascorbic acid metabolic process IEP Neighborhood
BP GO:0019853 L-ascorbic acid biosynthetic process IEP Neighborhood
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0031348 negative regulation of defense response IEP Neighborhood
MF GO:0031490 chromatin DNA binding IEP Neighborhood
BP GO:0032881 regulation of polysaccharide metabolic process IEP Neighborhood
BP GO:0033206 meiotic cytokinesis IEP Neighborhood
BP GO:0033542 fatty acid beta-oxidation, unsaturated, even number IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
BP GO:0034605 cellular response to heat IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0034976 response to endoplasmic reticulum stress IEP Neighborhood
BP GO:0035265 organ growth IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
MF GO:0042171 lysophosphatidic acid acyltransferase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
BP GO:0042538 hyperosmotic salinity response IEP Neighborhood
BP GO:0042539 hypotonic salinity response IEP Neighborhood
BP GO:0042542 response to hydrogen peroxide IEP Neighborhood
BP GO:0042761 very long-chain fatty acid biosynthetic process IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0043401 steroid hormone mediated signaling pathway IEP Neighborhood
BP GO:0043405 regulation of MAP kinase activity IEP Neighborhood
BP GO:0043407 negative regulation of MAP kinase activity IEP Neighborhood
BP GO:0043408 regulation of MAPK cascade IEP Neighborhood
BP GO:0043409 negative regulation of MAPK cascade IEP Neighborhood
BP GO:0046189 phenol-containing compound biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
BP GO:0046864 isoprenoid transport IEP Neighborhood
BP GO:0046865 terpenoid transport IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0048585 negative regulation of response to stimulus IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
BP GO:0050879 multicellular organismal movement IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0051990 (R)-2-hydroxyglutarate dehydrogenase activity IEP Neighborhood
BP GO:0060359 response to ammonium ion IEP Neighborhood
BP GO:0061640 cytoskeleton-dependent cytokinesis IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0070370 cellular heat acclimation IEP Neighborhood
MF GO:0070568 guanylyltransferase activity IEP Neighborhood
MF GO:0071617 lysophospholipid acyltransferase activity IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0080023 3R-hydroxyacyl-CoA dehydratase activity IEP Neighborhood
BP GO:0080168 abscisic acid transport IEP Neighborhood
BP GO:0090558 plant epidermis development IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
BP GO:1901421 positive regulation of response to alcohol IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1905959 positive regulation of cellular response to alcohol IEP Neighborhood
BP GO:2000904 regulation of starch metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!