MA_78196g0010

Description : transcription factor (mTERF). mTERF4 plastidial RNA splicing factor. mTERF mitochondrial RNA splicing factor

Gene families : OG0001159 (Archaeplastida) Phylogenetic Tree(s): OG0001159_tree ,
OG_05_0001847 (LandPlants) Phylogenetic Tree(s): OG_05_0001847_tree ,
OG_06_0001563 (SeedPlants) Phylogenetic Tree(s): OG_06_0001563_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_78196g0010
Cluster	HCCA: Cluster_88

Target	Alias	Description	ECC score	Gene Family Method
AT4G02990	No alias	Mitochondrial transcription termination factor family protein	0.04	Archaeplastida
GSVIVT01011061001	No alias	RNA processing.organelle machineries.RNA...	0.03	Archaeplastida
Gb_07758	No alias	transcription factor (mTERF)	0.08	Archaeplastida
Gb_36311	No alias	transcription factor (mTERF). mTERF4 plastidial RNA...	0.02	Archaeplastida
LOC_Os05g33500.1	No alias	transcription factor (mTERF). mTERF4 plastidial RNA...	0.03	Archaeplastida
LOC_Os07g04230.1	No alias	transcription factor (mTERF)	0.03	Archaeplastida
Mp1g22560.1	No alias	transcription factor (mTERF)	0.02	Archaeplastida
Pp3c1_25410V3.1	No alias	Mitochondrial transcription termination factor family protein	0.02	Archaeplastida
Solyc04g005630.3.1	No alias	transcription factor (mTERF). mTERF4 plastidial RNA...	0.02	Archaeplastida
Zm00001e027106_P001	No alias	transcription factor (mTERF). mTERF4 plastidial RNA...	0.03	Archaeplastida
Zm00001e032771_P001	No alias	transcription factor (mTERF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Neighborhood
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006536	glutamate metabolic process	IEP	Neighborhood
BP	GO:0006537	glutamate biosynthetic process	IEP	Neighborhood
BP	GO:0006801	superoxide metabolic process	IEP	Neighborhood
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Neighborhood
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0015930	glutamate synthase activity	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Neighborhood
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	Neighborhood
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Neighborhood
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Neighborhood
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0031072	heat shock protein binding	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0043650	dicarboxylic acid biosynthetic process	IEP	Neighborhood
MF	GO:0051082	unfolded protein binding	IEP	Neighborhood
MF	GO:0051743	red chlorophyll catabolite reductase activity	IEP	Neighborhood
MF	GO:0071949	FAD binding	IEP	Neighborhood
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003690	MTERF	177	485

External Links

No external refs found!

MA_78196g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation