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  5. MA_783123g0010

MA_783123g0010


Description : High mobility group B protein 6 OS=Arabidopsis thaliana (sp|q9sup7|hmgb6_arath : 196.0)


Gene families : OG0002362 (Archaeplastida) Phylogenetic Tree(s): OG0002362_tree ,
OG_05_0006706 (LandPlants) Phylogenetic Tree(s): OG_05_0006706_tree ,
OG_06_0006137 (SeedPlants) Phylogenetic Tree(s): OG_06_0006137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_783123g0010
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00093p00057150 evm_27.TU.AmTr_v1... High mobility group B protein 6 OS=Arabidopsis thaliana 0.08 Archaeplastida
AT4G11080 No alias HMG (high mobility group) box protein 0.06 Archaeplastida
AT4G23800 No alias HMG (high mobility group) box protein 0.1 Archaeplastida
GSVIVT01019504001 No alias High mobility group B protein 13 OS=Arabidopsis thaliana 0.14 Archaeplastida
Gb_00374 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.13 Archaeplastida
LOC_Os02g15810.1 No alias High mobility group B protein 13 OS=Arabidopsis thaliana... 0.13 Archaeplastida
Mp2g12330.1 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Pp3c11_8530V3.1 No alias HMG (high mobility group) box protein 0.07 Archaeplastida
Pp3c7_20570V3.1 No alias HMG (high mobility group) box protein 0.02 Archaeplastida
Smo73858 No alias High mobility group B protein 6 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc08g082070.3.1 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Zm00001e014266_P001 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.13 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
CC GO:0000796 condensin complex IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
BP GO:0006323 DNA packaging IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007076 mitotic chromosome condensation IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0030261 chromosome condensation IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 439 507
IPR009071 HMG_box_dom 195 257
IPR009071 HMG_box_dom 311 377
No external refs found!