1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_78481g0010

MA_78481g0010


Description : Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana (sp|q9can0|ppr99_arath : 370.0)


Gene families : OG0001630 (Archaeplastida) Phylogenetic Tree(s): OG0001630_tree ,
OG_05_0001046 (LandPlants) Phylogenetic Tree(s): OG_05_0001046_tree ,
OG_06_0000527 (SeedPlants) Phylogenetic Tree(s): OG_06_0000527_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_78481g0010

Target Alias Description ECC score Gene Family Method Actions
MA_10433091g0010 No alias Pentatricopeptide repeat-containing protein At1g62930,... 0.1 Archaeplastida
MA_175359g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
MA_32560g0010 No alias Pentatricopeptide repeat-containing protein At3g22470,... 0.06 Archaeplastida
MA_47344g0010 No alias Pentatricopeptide repeat-containing protein At5g39710... 0.12 Archaeplastida
MA_68479g0010 No alias Pentatricopeptide repeat-containing protein At1g62910... 0.03 Archaeplastida
MA_914400g0010 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.12 Archaeplastida
MA_9542585g0010 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.07 Archaeplastida
MA_959553g0010 No alias Pentatricopeptide repeat-containing protein At1g62910... 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 271 300
IPR002885 Pentatricopeptide_repeat 338 387
IPR002885 Pentatricopeptide_repeat 443 492
IPR002885 Pentatricopeptide_repeat 677 725
IPR002885 Pentatricopeptide_repeat 746 795
IPR002885 Pentatricopeptide_repeat 301 332
IPR002885 Pentatricopeptide_repeat 404 436
IPR002885 Pentatricopeptide_repeat 509 542
IPR002885 Pentatricopeptide_repeat 637 669
IPR002885 Pentatricopeptide_repeat 580 612
IPR002885 Pentatricopeptide_repeat 544 576
No external refs found!