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  5. MA_78640g0010

MA_78640g0010


Description : E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum (sp|p0ch30|ring1_goshi : 127.0)


Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0000046 (LandPlants) Phylogenetic Tree(s): OG_05_0000046_tree ,
OG_06_0001181 (SeedPlants) Phylogenetic Tree(s): OG_06_0001181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_78640g0010
Cluster HCCA: Cluster_386

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00057950 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
MA_413614g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_76949g0010 No alias E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana... 0.11 Archaeplastida
Mp8g17140.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e024455_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 105 147
No external refs found!