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  5. MA_78665g0010

MA_78665g0010


Description : transcription factor (TCP)


Gene families : OG0000332 (Archaeplastida) Phylogenetic Tree(s): OG0000332_tree ,
OG_05_0000167 (LandPlants) Phylogenetic Tree(s): OG_05_0000167_tree ,
OG_06_0000105 (SeedPlants) Phylogenetic Tree(s): OG_06_0000105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_78665g0010
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00158020 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
AMTR_s00154p00072430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.05 Archaeplastida
GSVIVT01008109001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.07 Archaeplastida
GSVIVT01008234001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
GSVIVT01021528001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
Gb_30049 No alias transcription factor (TCP) 0.03 Archaeplastida
Gb_38376 No alias transcription factor (TCP) 0.04 Archaeplastida
LOC_Os08g33530.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os12g42190.1 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_101752g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_3891g0010 No alias transcription factor (TCP) 0.05 Archaeplastida
Solyc02g077250.2.1 No alias transcription factor (TCP) 0.08 Archaeplastida
Solyc02g089020.2.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc02g089830.2.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc03g045030.2.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc06g069240.2.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc06g069460.3.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc07g053410.4.1 No alias transcription factor (TCP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 300 485
No external refs found!