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  5. MA_786911g0010

MA_786911g0010


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000056 (SeedPlants) Phylogenetic Tree(s): OG_06_0000056_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_786911g0010
Cluster HCCA: Cluster_441

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00126990 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
AMTR_s00006p00267830 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.regulation.IDF1 IRT1-ubiquitin ligase 0.04 Archaeplastida
AMTR_s00008p00185200 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00008p00200880 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00088p00040490 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00152p00054630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G15100 RHA2A RING-H2 finger A2A 0.06 Archaeplastida
AT2G42350 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G11360 RHA1B RING-H2 finger A1B 0.05 Archaeplastida
AT5G07040 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G53110 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT5G58580 ATL63, TL63 TOXICOS EN LEVADURA 63 0.05 Archaeplastida
AT5G66070 No alias RING/U-box superfamily protein 0.03 Archaeplastida
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01005189001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01008756001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01019530001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01024698001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01038717001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_04643 No alias RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_04644 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_04645 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_07702 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Gb_14312 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_14762 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_40644 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g20910.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g45390.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g46340.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g50930.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g52210.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os04g37740.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os04g49160.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os07g06560.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os09g29310.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10427748g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_1252g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_181940g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_308999g0010 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_479316g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_61349g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Mp1g19680.1 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp3g00390.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Mp7g06030.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Pp3c1_32230V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.04 Archaeplastida
Pp3c9_3390V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Solyc01g088440.2.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc01g105620.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g083460.3.1 No alias RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc03g112340.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc04g074790.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc06g064440.3.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc09g010650.1.1 No alias RING-H2 finger protein ATL33 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc11g010330.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e007129_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e009017_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e009988_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e010029_P001 No alias ubiquitin protein ligase (XERICO) 0.05 Archaeplastida
Zm00001e014832_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e015259_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e022781_P001 No alias RING-H2-class E3 ligase 0.08 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e031874_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e035560_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e037108_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e038229_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 164 207
No external refs found!