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  5. MA_7872524g0010

MA_7872524g0010


Description : ligand-gated cation channel (GLR)


Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0005412 (LandPlants) Phylogenetic Tree(s): OG_05_0005412_tree ,
OG_06_0004679 (SeedPlants) Phylogenetic Tree(s): OG_06_0004679_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_7872524g0010
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00140120 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
AMTR_s00019p00179820 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.02 Archaeplastida
AMTR_s00019p00180760 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
AMTR_s00019p00184790 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
AMTR_s00019p00186040 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
GSVIVT01033129001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.02 Archaeplastida
GSVIVT01033150001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.02 Archaeplastida
Gb_27767 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Gb_28362 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
LOC_Os09g26144.1 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
MA_10427025g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_10428521g0010 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
MA_10434982g0020 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
MA_216164g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g077290.2.1 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
Solyc06g063210.3.1 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Zm00001e009847_P001 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Zm00001e023728_P001 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 28 77
No external refs found!