1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G27070

AT1G27070


Description : 5'-AMP-activated protein kinase-related


Gene families : OG0002068 (Archaeplastida) Phylogenetic Tree(s): OG0002068_tree ,
OG_05_0005487 (LandPlants) Phylogenetic Tree(s): OG_05_0005487_tree ,
OG_06_0005467 (SeedPlants) Phylogenetic Tree(s): OG_06_0005467_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G27070
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000792.52 No alias No description available 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000291 nuclear-transcribed mRNA catabolic process, exonucleolytic IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004532 exoribonuclease activity IEP Neighborhood
MF GO:0004534 5'-3' exoribonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006342 chromatin silencing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0007033 vacuole organization IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0008284 positive regulation of cell proliferation IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008409 5'-3' exonuclease activity IEP Neighborhood
CC GO:0009295 nucleoid IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009910 negative regulation of flower development IEP Neighborhood
BP GO:0009911 positive regulation of flower development IEP Neighborhood
BP GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid IEP Neighborhood
BP GO:0010586 miRNA metabolic process IEP Neighborhood
BP GO:0010587 miRNA catabolic process IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0030488 tRNA methylation IEP Neighborhood
BP GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0032386 regulation of intracellular transport IEP Neighborhood
BP GO:0032388 positive regulation of intracellular transport IEP Neighborhood
BP GO:0032880 regulation of protein localization IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033157 regulation of intracellular protein transport IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0034661 ncRNA catabolic process IEP Neighborhood
BP GO:0040029 regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
CC GO:0042644 chloroplast nucleoid IEP Neighborhood
CC GO:0042646 plastid nucleoid IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043200 response to amino acid IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0043687 post-translational protein modification IEP Neighborhood
BP GO:0044088 regulation of vacuole organization IEP Neighborhood
BP GO:0044090 positive regulation of vacuole organization IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051050 positive regulation of transport IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051222 positive regulation of protein transport IEP Neighborhood
BP GO:0051223 regulation of protein transport IEP Neighborhood
BP GO:0051253 negative regulation of RNA metabolic process IEP Neighborhood
BP GO:0060341 regulation of cellular localization IEP Neighborhood
BP GO:0070201 regulation of establishment of protein localization IEP Neighborhood
BP GO:0070536 protein K63-linked deubiquitination IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071108 protein K48-linked deubiquitination IEP Neighborhood
BP GO:0080178 5-carbamoylmethyl uridine residue modification IEP Neighborhood
BP GO:0090087 regulation of peptide transport IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0090316 positive regulation of intracellular protein transport IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903827 regulation of cellular protein localization IEP Neighborhood
BP GO:1903829 positive regulation of cellular protein localization IEP Neighborhood
BP GO:1904951 positive regulation of establishment of protein localization IEP Neighborhood
BP GO:2000242 negative regulation of reproductive process IEP Neighborhood
BP GO:2000243 positive regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR032640 AMPK1_CBM 456 529
No external refs found!