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  5. MA_792493g0010

MA_792493g0010


Description : alpha-class expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0000041 (SeedPlants) Phylogenetic Tree(s): OG_06_0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_792493g0010
Cluster HCCA: Cluster_468

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00264980 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00072p00134750 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00110p00103570 evm_27.TU.AmTr_v1... Expansin-A4 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.04 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.02 Archaeplastida
AT1G62980 EXPA18, EXP18,... expansin A18 0.04 Archaeplastida
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.03 Archaeplastida
AT2G40610 EXPA8, ATHEXP... expansin A8 0.03 Archaeplastida
AT5G02260 EXP9, EXPA9,... expansin A9 0.03 Archaeplastida
GSVIVT01025509001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01033691001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Gb_06127 No alias alpha-class expansin 0.02 Archaeplastida
Gb_09118 No alias alpha-class expansin 0.04 Archaeplastida
Gb_11024 No alias Expansin-A10 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_28036 No alias Expansin-A29 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os02g16809.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os08g44790.1 No alias alpha-class expansin 0.02 Archaeplastida
MA_100868g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_10232070g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_10299189g0010 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_114349g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_130258g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_134592g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_3618g0010 No alias Expansin-A15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_45587g0020 No alias alpha-class expansin 0.05 Archaeplastida
MA_51645g0010 No alias Expansin-A1 OS=Arabidopsis thaliana... 0.08 Archaeplastida
MA_6583g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_7218g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp1g22720.1 No alias Expansin-A4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp1g22740.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp1g24230.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp2g18600.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp2g18610.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp3g09770.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp3g22690.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g24470.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp5g01930.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp5g20420.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp8g18860.1 No alias alpha-class expansin 0.05 Archaeplastida
Pp3c12_4560V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c14_18030V3.1 No alias expansin A14 0.03 Archaeplastida
Pp3c18_19660V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.04 Archaeplastida
Pp3c20_5780V3.1 No alias expansin A15 0.02 Archaeplastida
Pp3c21_1850V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c22_760V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c3_16280V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c8_13450V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c8_14900V3.1 No alias expansin A14 0.03 Archaeplastida
Pp3c8_870V3.1 No alias expansin A1 0.02 Archaeplastida
Smo143857 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo179212 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
Smo230202 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo410512 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo419575 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Smo90332 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo91129 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Solyc01g010890.4.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc03g115890.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc04g081870.4.1 No alias alpha-class expansin 0.07 Archaeplastida
Solyc05g007830.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc05g052250.3.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc06g076220.3.1 No alias alpha-class expansin 0.05 Archaeplastida
Solyc09g018020.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc12g089380.2.1 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004719_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004720_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004721_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e019433_P001 No alias alpha-class expansin 0.05 Archaeplastida
Zm00001e038997_P001 No alias alpha-class expansin 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 115 192
IPR009009 RlpA-like_DPBB 19 103
No external refs found!