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  5. MA_80122g0010

MA_80122g0010


Description : transcription factor (AS2/LOB)


Gene families : OG0000724 (Archaeplastida) Phylogenetic Tree(s): OG0000724_tree ,
OG_05_0000483 (LandPlants) Phylogenetic Tree(s): OG_05_0000483_tree ,
OG_06_0000437 (SeedPlants) Phylogenetic Tree(s): OG_06_0000437_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_80122g0010
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00051070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
AMTR_s00137p00087340 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.07 Archaeplastida
AT1G68510 LBD42 LOB domain-containing protein 42 0.02 Archaeplastida
AT4G37540 LBD39 LOB domain-containing protein 39 0.03 Archaeplastida
AT5G67420 LBD37, ASL39 LOB domain-containing protein 37 0.03 Archaeplastida
GSVIVT01011896001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01031035001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.08 Archaeplastida
GSVIVT01037853001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
Gb_36943 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os01g20800.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g32770.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_223267g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_70989g0010 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e001981_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e027417_P001 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e032150_P001 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 4 100
No external refs found!