Description : no hits & (original description: none)
Gene families : OG0000989 (Archaeplastida) Phylogenetic Tree(s): OG0000989_tree ,
OG_05_0017285 (LandPlants) Phylogenetic Tree(s): OG_05_0017285_tree ,
OG_06_0015049 (SeedPlants) Phylogenetic Tree(s): OG_06_0015049_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_81219g0010 | |
Cluster | HCCA: Cluster_277 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00022p00114710 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.spliceosome... | 0.07 | Archaeplastida | |
AMTR_s00077p00041680 | evm_27.TU.AmTr_v1... | DExH-box ATP-dependent RNA helicase DExH12... | 0.02 | Archaeplastida | |
AT5G61140 | No alias | U5 small nuclear ribonucleoprotein helicase | 0.02 | Archaeplastida | |
Cpa|evm.model.tig00000865.27 | No alias | DExH-box ATP-dependent RNA helicase DExH12... | 0.03 | Archaeplastida | |
Cre17.g744147 | No alias | RNA processing.RNA splicing.spliceosome... | 0.02 | Archaeplastida | |
GSVIVT01010769001 | No alias | DExH-box ATP-dependent RNA helicase DExH12... | 0.04 | Archaeplastida | |
Gb_18049 | No alias | DExH-box ATP-dependent RNA helicase DExH14... | 0.05 | Archaeplastida | |
Gb_27895 | No alias | RNA helicase (Brr2) | 0.05 | Archaeplastida | |
LOC_Os02g01740.1 | No alias | RNA helicase (Brr2) | 0.04 | Archaeplastida | |
LOC_Os03g11470.1 | No alias | DExH-box ATP-dependent RNA helicase DExH14... | 0.03 | Archaeplastida | |
MA_81219g0020 | No alias | DExH-box ATP-dependent RNA helicase DExH12... | 0.04 | Archaeplastida | |
MA_81219g0030 | No alias | DExH-box ATP-dependent RNA helicase DExH12... | 0.04 | Archaeplastida | |
Mp1g06890.1 | No alias | RNA helicase (Brr2) | 0.06 | Archaeplastida | |
Mp7g00250.1 | No alias | RNA helicase (Brr2) | 0.03 | Archaeplastida | |
Pp3c1_35880V3.1 | No alias | U5 small nuclear ribonucleoprotein helicase, putative | 0.03 | Archaeplastida | |
Pp3c2_9850V3.1 | No alias | U5 small nuclear ribonucleoprotein helicase | 0.02 | Archaeplastida | |
Smo144158 | No alias | RNA processing.RNA splicing.spliceosome... | 0.03 | Archaeplastida | |
Solyc06g082100.4.1 | No alias | RNA helicase (Brr2) | 0.03 | Archaeplastida | |
Zm00001e035676_P001 | No alias | RNA helicase (Brr2) | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
MF | GO:0004527 | exonuclease activity | IEP | Neighborhood |
MF | GO:0004594 | pantothenate kinase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | Neighborhood |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Neighborhood |
BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
BP | GO:0006281 | DNA repair | IEP | Neighborhood |
BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
BP | GO:0006732 | coenzyme metabolic process | IEP | Neighborhood |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0006950 | response to stress | IEP | Neighborhood |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Neighborhood |
BP | GO:0009108 | coenzyme biosynthetic process | IEP | Neighborhood |
BP | GO:0009117 | nucleotide metabolic process | IEP | Neighborhood |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Neighborhood |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | Neighborhood |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | Neighborhood |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | Neighborhood |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Neighborhood |
BP | GO:0015936 | coenzyme A metabolic process | IEP | Neighborhood |
BP | GO:0015937 | coenzyme A biosynthetic process | IEP | Neighborhood |
BP | GO:0016197 | endosomal transport | IEP | Neighborhood |
BP | GO:0016482 | cytosolic transport | IEP | Neighborhood |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
BP | GO:0019637 | organophosphate metabolic process | IEP | Neighborhood |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | Neighborhood |
CC | GO:0030906 | retromer, cargo-selective complex | IEP | Neighborhood |
MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
CC | GO:0031011 | Ino80 complex | IEP | Neighborhood |
CC | GO:0033202 | DNA helicase complex | IEP | Neighborhood |
BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Neighborhood |
BP | GO:0033866 | nucleoside bisphosphate biosynthetic process | IEP | Neighborhood |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Neighborhood |
BP | GO:0034030 | ribonucleoside bisphosphate biosynthetic process | IEP | Neighborhood |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Neighborhood |
BP | GO:0034033 | purine nucleoside bisphosphate biosynthetic process | IEP | Neighborhood |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Neighborhood |
CC | GO:0044454 | nuclear chromosome part | IEP | Neighborhood |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Neighborhood |
BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
BP | GO:0051186 | cofactor metabolic process | IEP | Neighborhood |
BP | GO:0051188 | cofactor biosynthetic process | IEP | Neighborhood |
BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Neighborhood |
CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Neighborhood |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
CC | GO:0097346 | INO80-type complex | IEP | Neighborhood |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Neighborhood |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Neighborhood |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Neighborhood |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
CC | GO:1904949 | ATPase complex | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |