Aliases : SAC51
Description : sequence-specific DNA binding transcription factors;transcription regulators
Gene families : OG0012931 (Archaeplastida) Phylogenetic Tree(s): OG0012931_tree ,
OG_05_0012883 (LandPlants) Phylogenetic Tree(s): OG_05_0012883_tree ,
OG_06_0012909 (SeedPlants) Phylogenetic Tree(s): OG_06_0012909_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G64340 | |
Cluster | HCCA: Cluster_190 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Solyc01g105690.2.1 | No alias | transcription factor (bHLH) | 0.07 | Archaeplastida | |
Solyc04g076030.3.1 | No alias | transcription factor (bHLH) | 0.08 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000271 | polysaccharide biosynthetic process | RCA | Interproscan |
MF | GO:0003700 | DNA-binding transcription factor activity | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | TAS | Interproscan |
BP | GO:0007155 | cell adhesion | RCA | Interproscan |
BP | GO:0009825 | multidimensional cell growth | RCA | Interproscan |
BP | GO:0009826 | unidimensional cell growth | IMP | Interproscan |
BP | GO:0009855 | determination of bilateral symmetry | RCA | Interproscan |
BP | GO:0009887 | animal organ morphogenesis | RCA | Interproscan |
BP | GO:0009932 | cell tip growth | RCA | Interproscan |
BP | GO:0010051 | xylem and phloem pattern formation | RCA | Interproscan |
BP | GO:0010075 | regulation of meristem growth | RCA | Interproscan |
BP | GO:0010090 | trichome morphogenesis | RCA | Interproscan |
BP | GO:0010413 | glucuronoxylan metabolic process | RCA | Interproscan |
BP | GO:0010817 | regulation of hormone levels | RCA | Interproscan |
BP | GO:0043481 | anthocyanin accumulation in tissues in response to UV light | RCA | Interproscan |
BP | GO:0045010 | actin nucleation | RCA | Interproscan |
BP | GO:0045492 | xylan biosynthetic process | RCA | Interproscan |
BP | GO:0048439 | flower morphogenesis | RCA | Interproscan |
BP | GO:0048519 | negative regulation of biological process | RCA | Interproscan |
BP | GO:0048765 | root hair cell differentiation | RCA | Interproscan |
BP | GO:0048767 | root hair elongation | RCA | Interproscan |
BP | GO:0071555 | cell wall organization | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
MF | GO:0004525 | ribonuclease III activity | IEP | Neighborhood |
MF | GO:0004565 | beta-galactosidase activity | IEP | Neighborhood |
MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
MF | GO:0004673 | protein histidine kinase activity | IEP | Neighborhood |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Neighborhood |
MF | GO:0005034 | osmosensor activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005496 | steroid binding | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
CC | GO:0005886 | plasma membrane | IEP | Neighborhood |
BP | GO:0006304 | DNA modification | IEP | Neighborhood |
BP | GO:0006305 | DNA alkylation | IEP | Neighborhood |
BP | GO:0006306 | DNA methylation | IEP | Neighborhood |
BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
BP | GO:0006342 | chromatin silencing | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0007165 | signal transduction | IEP | Neighborhood |
BP | GO:0007166 | cell surface receptor signaling pathway | IEP | Neighborhood |
BP | GO:0007167 | enzyme linked receptor protein signaling pathway | IEP | Neighborhood |
BP | GO:0007169 | transmembrane receptor protein tyrosine kinase signaling pathway | IEP | Neighborhood |
BP | GO:0007267 | cell-cell signaling | IEP | Neighborhood |
MF | GO:0008142 | oxysterol binding | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
CC | GO:0009574 | preprophase band | IEP | Neighborhood |
BP | GO:0009615 | response to virus | IEP | Neighborhood |
BP | GO:0009616 | virus induced gene silencing | IEP | Neighborhood |
MF | GO:0009884 | cytokinin receptor activity | IEP | Neighborhood |
BP | GO:0009888 | tissue development | IEP | Neighborhood |
BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0009894 | regulation of catabolic process | IEP | Neighborhood |
BP | GO:0010014 | meristem initiation | IEP | Neighborhood |
BP | GO:0010073 | meristem maintenance | IEP | Neighborhood |
BP | GO:0010078 | maintenance of root meristem identity | IEP | Neighborhood |
BP | GO:0010087 | phloem or xylem histogenesis | IEP | Neighborhood |
BP | GO:0010216 | maintenance of DNA methylation | IEP | Neighborhood |
BP | GO:0010228 | vegetative to reproductive phase transition of meristem | IEP | Neighborhood |
BP | GO:0010267 | production of ta-siRNAs involved in RNA interference | IEP | Neighborhood |
BP | GO:0010271 | regulation of chlorophyll catabolic process | IEP | Neighborhood |
MF | GO:0010348 | lithium:proton antiporter activity | IEP | Neighborhood |
BP | GO:0010352 | lithium ion export across the plasma membrane | IEP | Neighborhood |
BP | GO:0010479 | stele development | IEP | Neighborhood |
BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0010959 | regulation of metal ion transport | IEP | Neighborhood |
MF | GO:0015925 | galactosidase activity | IEP | Neighborhood |
CC | GO:0016020 | membrane | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
BP | GO:0016458 | gene silencing | IEP | Neighborhood |
BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Neighborhood |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Neighborhood |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Neighborhood |
BP | GO:0016926 | protein desumoylation | IEP | Neighborhood |
BP | GO:0016999 | antibiotic metabolic process | IEP | Neighborhood |
BP | GO:0017000 | antibiotic biosynthetic process | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Neighborhood |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
BP | GO:0023052 | signaling | IEP | Neighborhood |
BP | GO:0030422 | production of siRNA involved in RNA interference | IEP | Neighborhood |
MF | GO:0030551 | cyclic nucleotide binding | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
BP | GO:0031047 | gene silencing by RNA | IEP | Neighborhood |
BP | GO:0031050 | dsRNA fragmentation | IEP | Neighborhood |
BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0031329 | regulation of cellular catabolic process | IEP | Neighborhood |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032934 | sterol binding | IEP | Neighborhood |
BP | GO:0034756 | regulation of iron ion transport | IEP | Neighborhood |
BP | GO:0034757 | negative regulation of iron ion transport | IEP | Neighborhood |
BP | GO:0035196 | production of miRNAs involved in gene silencing by miRNA | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
BP | GO:0035821 | modification of morphology or physiology of other organism | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
BP | GO:0040029 | regulation of gene expression, epigenetic | IEP | Neighborhood |
BP | GO:0042743 | hydrogen peroxide metabolic process | IEP | Neighborhood |
MF | GO:0042802 | identical protein binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
BP | GO:0043271 | negative regulation of ion transport | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
MF | GO:0043424 | protein histidine kinase binding | IEP | Neighborhood |
BP | GO:0044003 | modification by symbiont of host morphology or physiology | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0044419 | interspecies interaction between organisms | IEP | Neighborhood |
BP | GO:0044728 | DNA methylation or demethylation | IEP | Neighborhood |
BP | GO:0045814 | negative regulation of gene expression, epigenetic | IEP | Neighborhood |
BP | GO:0045892 | negative regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0045926 | negative regulation of growth | IEP | Neighborhood |
BP | GO:0045927 | positive regulation of growth | IEP | Neighborhood |
BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0050665 | hydrogen peroxide biosynthetic process | IEP | Neighborhood |
BP | GO:0051051 | negative regulation of transport | IEP | Neighborhood |
BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051188 | cofactor biosynthetic process | IEP | Neighborhood |
BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0051607 | defense response to virus | IEP | Neighborhood |
BP | GO:0051701 | interaction with host | IEP | Neighborhood |
BP | GO:0051817 | modification of morphology or physiology of other organism involved in symbiotic interaction | IEP | Neighborhood |
BP | GO:0052018 | modulation by symbiont of RNA levels in host | IEP | Neighborhood |
BP | GO:0052249 | modulation of RNA levels in other organism involved in symbiotic interaction | IEP | Neighborhood |
BP | GO:0055070 | copper ion homeostasis | IEP | Neighborhood |
BP | GO:0070417 | cellular response to cold | IEP | Neighborhood |
BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
BP | GO:0070918 | production of small RNA involved in gene silencing by RNA | IEP | Neighborhood |
BP | GO:0071215 | cellular response to abscisic acid stimulus | IEP | Neighborhood |
BP | GO:0071396 | cellular response to lipid | IEP | Neighborhood |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Neighborhood |
BP | GO:0080117 | secondary growth | IEP | Neighborhood |
BP | GO:0080190 | lateral growth | IEP | Neighborhood |
BP | GO:0090056 | regulation of chlorophyll metabolic process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
BP | GO:0097306 | cellular response to alcohol | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
BP | GO:0098586 | cellular response to virus | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
BP | GO:0140115 | export across plasma membrane | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
BP | GO:1901401 | regulation of tetrapyrrole metabolic process | IEP | Neighborhood |
BP | GO:1901404 | regulation of tetrapyrrole catabolic process | IEP | Neighborhood |
BP | GO:1902679 | negative regulation of RNA biosynthetic process | IEP | Neighborhood |
BP | GO:1903409 | reactive oxygen species biosynthetic process | IEP | Neighborhood |
BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | IEP | Neighborhood |
BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2000603 | regulation of secondary growth | IEP | Neighborhood |
BP | GO:2000604 | negative regulation of secondary growth | IEP | Neighborhood |
BP | GO:2000605 | positive regulation of secondary growth | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |