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  5. AT5G64640

AT5G64640


Description : Plant invertase/pectin methylesterase inhibitor superfamily


Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0001525 (LandPlants) Phylogenetic Tree(s): OG_05_0001525_tree ,
OG_06_0001343 (SeedPlants) Phylogenetic Tree(s): OG_06_0001343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G64640
Cluster HCCA: Cluster_451

Target Alias Description ECC score Gene Family Method Actions
AT5G53370 ATPMEPCRF, PMEPCRF pectin methylesterase PCR fragment F 0.04 Archaeplastida
GSVIVT01031667001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.01 Archaeplastida
GSVIVT01037344001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Gb_18512 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os11g07090.1 No alias pectin methylesterase 0.02 Archaeplastida
Pp3c17_6440V3.1 No alias pectin methylesterase PCR fragment F 0.01 Archaeplastida
Solyc11g005770.2.1 No alias pectin methylesterase 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0009505 plant-type cell wall ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
MF GO:0030599 pectinesterase activity ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004702 obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006857 oligopeptide transport IEP Neighborhood
BP GO:0007166 cell surface receptor signaling pathway IEP Neighborhood
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP Neighborhood
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 288 595
IPR006501 Pectinesterase_inhib_dom 93 237
No external refs found!