- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : E3 ubiquitin ligase (PUB)
Gene families : OG0001367 (Archaeplastida) Phylogenetic Tree(s): OG0001367_tree ,
OG_05_0001852 (LandPlants) Phylogenetic Tree(s): OG_05_0001852_tree ,
OG_06_0008737 (SeedPlants) Phylogenetic Tree(s): OG_06_0008737_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_82334g0010 | |
| Cluster | HCCA: Cluster_447 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00268880 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| GSVIVT01000832001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| Gb_22324 | No alias | E3 ubiquitin ligase (PUB) | 0.03 | Archaeplastida | |
| Mp1g26780.1 | No alias | E3 ubiquitin ligase (PUB) | 0.02 | Archaeplastida | |
| Solyc01g068490.4.1 | No alias | E3 ubiquitin ligase (PUB) | 0.02 | Archaeplastida | |
| Solyc03g082690.3.1 | No alias | E3 ubiquitin ligase (PUB) | 0.03 | Archaeplastida | |
| Zm00001e018652_P001 | No alias | E3 ubiquitin ligase (PUB) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| MF | GO:0005543 | phospholipid binding | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| MF | GO:0008289 | lipid binding | IEP | Neighborhood |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016759 | cellulose synthase activity | IEP | Neighborhood |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| BP | GO:0030243 | cellulose metabolic process | IEP | Neighborhood |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |