AT1G27220


Description : paired amphipathic helix repeat-containing protein


Gene families : OG0005095 (Archaeplastida) Phylogenetic Tree(s): OG0005095_tree ,
OG_05_0003484 (LandPlants) Phylogenetic Tree(s): OG_05_0003484_tree ,
OG_06_0002865 (SeedPlants) Phylogenetic Tree(s): OG_06_0002865_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G27220
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT1G77815 No alias BEST Arabidopsis thaliana protein match is:... 0.01 Archaeplastida
AT5G44470 No alias BEST Arabidopsis thaliana protein match is:... 0.01 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0080117 secondary growth IEP Neighborhood
BP GO:0080190 lateral growth IEP Neighborhood
InterPro domains Description Start Stop
IPR003822 PAH 31 75
IPR002156 RNaseH_domain 86 169
No external refs found!