Aliases : AGL78
Description : AGAMOUS-like 78
Gene families : OG0008125 (Archaeplastida) Phylogenetic Tree(s): OG0008125_tree ,
OG_05_0006730 (LandPlants) Phylogenetic Tree(s): OG_05_0006730_tree ,
OG_06_0004264 (SeedPlants) Phylogenetic Tree(s): OG_06_0004264_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G65330 | |
Cluster | HCCA: Cluster_268 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G27050 | AGL101 | AGAMOUS-like 101 | 0.03 | Archaeplastida | |
AT5G27580 | AGL89 | AGAMOUS-like 89 | 0.06 | Archaeplastida | |
AT5G40120 | AGL76 | AGAMOUS-like 76 | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000785 | chromatin | IEP | Neighborhood |
CC | GO:0005887 | integral component of plasma membrane | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
BP | GO:0009860 | pollen tube growth | IEP | Neighborhood |
BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | Neighborhood |
BP | GO:0022412 | cellular process involved in reproduction in multicellular organism | IEP | Neighborhood |
BP | GO:0048235 | pollen sperm cell differentiation | IEP | Neighborhood |
BP | GO:0051865 | protein autoubiquitination | IEP | Neighborhood |
BP | GO:1901264 | carbohydrate derivative transport | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002100 | TF_MADSbox | 8 | 52 |
No external refs found! |