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  5. AT1G03550

AT1G03550


Description : Secretory carrier membrane protein (SCAMP) family protein


Gene families : OG0000869 (Archaeplastida) Phylogenetic Tree(s): OG0000869_tree ,
OG_05_0000831 (LandPlants) Phylogenetic Tree(s): OG_05_0000831_tree ,
OG_06_0000621 (SeedPlants) Phylogenetic Tree(s): OG_06_0000621_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G03550
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01012985001 No alias Secretory carrier-associated membrane protein 4... 0.02 Archaeplastida
LOC_Os08g06440.1 No alias Secretory carrier-associated membrane protein 6 OS=Oryza... 0.01 Archaeplastida
Zm00001e010563_P001 No alias Secretory carrier-associated membrane protein 1 OS=Oryza... 0.01 Archaeplastida
Zm00001e019630_P002 No alias Secretory carrier-associated membrane protein 2 OS=Oryza... 0.02 Archaeplastida
Zm00001e027375_P001 No alias Secretory carrier-associated membrane protein 3 OS=Oryza... 0.01 Archaeplastida
Zm00001e035266_P003 No alias Secretory carrier-associated membrane protein 1 OS=Oryza... 0.01 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0016192 vesicle-mediated transport RCA Interproscan
MF GO:0022857 transmembrane transporter activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0004004 ATP-dependent RNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004416 hydroxyacylglutathione hydrolase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006089 lactate metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008186 RNA-dependent ATPase activity IEP Neighborhood
BP GO:0009438 methylglyoxal metabolic process IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0009561 megagametogenesis IEP Neighborhood
BP GO:0009827 plant-type cell wall modification IEP Neighborhood
BP GO:0009846 pollen germination IEP Neighborhood
BP GO:0009860 pollen tube growth IEP Neighborhood
BP GO:0009962 regulation of flavonoid biosynthetic process IEP Neighborhood
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity IEP Neighborhood
CC GO:0016324 apical plasma membrane IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0042180 cellular ketone metabolic process IEP Neighborhood
BP GO:0042182 ketone catabolic process IEP Neighborhood
CC GO:0042995 cell projection IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046185 aldehyde catabolic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0051596 methylglyoxal catabolic process IEP Neighborhood
BP GO:0061727 methylglyoxal catabolic process to lactate IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
CC GO:0090406 pollen tube IEP Neighborhood
CC GO:0098590 plasma membrane region IEP Neighborhood
CC GO:0120025 plasma membrane bounded cell projection IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR007273 SCAMP 92 263
No external refs found!