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  5. AT5G65850

AT5G65850


Description : F-box and associated interaction domains-containing protein


Gene families : OG0000466 (Archaeplastida) Phylogenetic Tree(s): OG0000466_tree ,
OG_05_0000239 (LandPlants) Phylogenetic Tree(s): OG_05_0000239_tree ,
OG_06_0000111 (SeedPlants) Phylogenetic Tree(s): OG_06_0000111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G65850
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT1G23037 No alias F-box associated ubiquitination effector family protein 0.03 Archaeplastida
AT1G26515 No alias F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT1G30790 No alias F-box and associated interaction domains-containing protein 0.11 Archaeplastida
AT1G30925 No alias phospholipase Cs 0.1 Archaeplastida
AT1G30930 No alias F-box family protein 0.04 Archaeplastida
AT1G31090 No alias F-box family protein 0.05 Archaeplastida
AT1G31163 No alias F-box associated ubiquitination effector family protein 0.09 Archaeplastida
AT1G31620 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.08 Archaeplastida
AT1G32660 No alias F-box and associated interaction domains-containing protein 0.13 Archaeplastida
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT1G33020 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT1G46840 No alias F-box family protein 0.11 Archaeplastida
AT1G47350 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT1G47730 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT1G47765 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT1G47800 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT1G47810 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT1G52495 No alias No description available 0.03 Archaeplastida
AT1G53360 No alias F-box associated ubiquitination effector family protein 0.11 Archaeplastida
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT1G53815 No alias F-box family protein 0.04 Archaeplastida
AT1G55070 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT1G61060 No alias F-box family protein 0.06 Archaeplastida
AT1G67130 No alias F-box family protein 0.12 Archaeplastida
AT2G02890 No alias F-box family protein 0.05 Archaeplastida
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT2G16450 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT2G16810 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT2G19630 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT2G23160 No alias F-box family protein 0.12 Archaeplastida
AT2G31470 DOR F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT2G32470 No alias F-box associated ubiquitination effector family protein 0.14 Archaeplastida
AT2G40910 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G23960 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G47150 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G49440 No alias F-box associated ubiquitination effector family protein 0.03 Archaeplastida
AT3G52320 No alias F-box and associated interaction domains-containing protein 0.12 Archaeplastida
AT3G57580 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT4G13060 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT4G19930 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT4G29970 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT5G15670 No alias F-box family protein 0.03 Archaeplastida
AT5G18160 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT5G22791 No alias F-box family protein 0.06 Archaeplastida
AT5G38810 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT5G42430 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT5G44220 No alias F-box family protein 0.03 Archaeplastida
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.1 Archaeplastida
AT5G50220 No alias F-box family protein 0.06 Archaeplastida
AT5G52620 No alias F-box associated ubiquitination effector family protein 0.13 Archaeplastida
AT5G62060 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP Neighborhood
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0000723 telomere maintenance IEP Neighborhood
CC GO:0001673 male germ cell nucleus IEP Neighborhood
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007129 synapsis IEP Neighborhood
BP GO:0007131 reciprocal meiotic recombination IEP Neighborhood
BP GO:0007140 male meiotic nuclear division IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
BP GO:0009688 abscisic acid biosynthetic process IEP Neighborhood
BP GO:0010098 suspensor development IEP Neighborhood
BP GO:0010212 response to ionizing radiation IEP Neighborhood
BP GO:0010332 response to gamma radiation IEP Neighborhood
BP GO:0016444 somatic cell DNA recombination IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0030332 cyclin binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0032204 regulation of telomere maintenance IEP Neighborhood
BP GO:0032504 multicellular organism reproduction IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033044 regulation of chromosome organization IEP Neighborhood
BP GO:0035825 homologous recombination IEP Neighborhood
BP GO:0042023 DNA endoreduplication IEP Neighborhood
BP GO:0042138 meiotic DNA double-strand break formation IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0043073 germ cell nucleus IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043247 telomere maintenance in response to DNA damage IEP Neighborhood
BP GO:0043289 apocarotenoid biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044786 cell cycle DNA replication IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0048598 embryonic morphogenesis IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051568 histone H3-K4 methylation IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0061982 meiosis I cell cycle process IEP Neighborhood
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0080159 zygote elongation IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
BP GO:0140013 meiotic nuclear division IEP Neighborhood
BP GO:1902645 tertiary alcohol biosynthetic process IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 219 343
IPR001810 F-box_dom 35 74
No external refs found!