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  5. MA_8567568g0010

MA_8567568g0010


Description : DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana (sp|q8gy84|rh10_arath : 224.0)


Gene families : OG0000758 (Archaeplastida) Phylogenetic Tree(s): OG0000758_tree ,
OG_05_0001508 (LandPlants) Phylogenetic Tree(s): OG_05_0001508_tree ,
OG_06_0001565 (SeedPlants) Phylogenetic Tree(s): OG_06_0001565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_8567568g0010
Cluster HCCA: Cluster_486

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00121p00103870 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cre10.g420900 No alias DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa... 0.02 Archaeplastida
Gb_36370 No alias DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis... 0.04 Archaeplastida
Mp1g19410.1 No alias SSU processome assembly factor (SWA3) 0.04 Archaeplastida
Mp4g20180.1 No alias DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis... 0.06 Archaeplastida
Pp3c9_14310V3.1 No alias DEA(D/H)-box RNA helicase family protein 0.05 Archaeplastida
Solyc04g081580.4.1 No alias DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis... 0.05 Archaeplastida
Solyc10g007550.3.1 No alias DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e010143_P002 No alias DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e013281_P004 No alias DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e035639_P002 No alias SSU processome assembly factor (SWA3) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 120 210
No external refs found!