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  5. MA_8693914g0010

MA_8693914g0010


Description : RING-H2 finger protein ATL73 OS=Arabidopsis thaliana (sp|q9flc6|atl73_arath : 124.0)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000216 (SeedPlants) Phylogenetic Tree(s): OG_06_0000216_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_8693914g0010
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00161170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00030p00032810 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G04360 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G74410 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.02 Archaeplastida
AT2G27940 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G37580 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G42360 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G15975 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Cpa|evm.model.tig00020934.54 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01022306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
Gb_04301 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_20666 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_23066 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g16120.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g61470.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os01g64620.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g05560.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os03g22110.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g50100.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os06g34470.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g44950.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os12g42540.1 No alias RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_122471g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_177673g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_31736g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_3437366g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_462422g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_61738g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_9764263g0010 No alias RING-H2 finger protein ATL67 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Smo172324 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc01g006910.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc03g033330.3.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g114190.1.1 No alias RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g011880.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc11g005320.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g073170.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e011901_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e022781_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e036289_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 117 160
No external refs found!