MA_8714955g0010

Description : COB cellulose microfibrils and hemicellulose interaction protein

Gene families : OG0000661 (Archaeplastida) Phylogenetic Tree(s): OG0000661_tree ,
OG_05_0012845 (LandPlants) Phylogenetic Tree(s): OG_05_0012845_tree ,
OG_06_0016878 (SeedPlants) Phylogenetic Tree(s): OG_06_0016878_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_8714955g0010
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
AT5G60950	COBL5	COBRA-like protein 5 precursor	0.04	Archaeplastida
GSVIVT01008129001	No alias	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.03	Archaeplastida
GSVIVT01036565001	No alias	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.03	Archaeplastida
GSVIVT01036566001	No alias	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.04	Archaeplastida
Gb_25603	No alias	COB cellulose microfibrils and hemicellulose interaction protein	0.02	Archaeplastida
Gb_36719	No alias	COB cellulose microfibrils and hemicellulose interaction protein	0.03	Archaeplastida
LOC_Os10g35460.1	No alias	COB cellulose microfibrils and hemicellulose interaction protein	0.02	Archaeplastida
Mp7g06600.1	No alias	COB cellulose microfibrils and hemicellulose interaction protein	0.03	Archaeplastida
Pp3c12_4550V3.1	No alias	COBRA-like protein 1 precursor	0.02	Archaeplastida
Smo271954	No alias	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.02	Archaeplastida
Solyc01g103860.4.1	No alias	COB cellulose microfibrils and hemicellulose interaction protein	0.02	Archaeplastida
Solyc01g103877.1.1	No alias	COB cellulose microfibrils and hemicellulose interaction protein	0.03	Archaeplastida
Zm00001e005710_P002	No alias	No annotation	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010215	cellulose microfibril organization	IEA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0030198	extracellular matrix organization	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031225	anchored component of membrane	IEA	Interproscan
BP	GO:0043062	extracellular structure organization	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006918	COBRA_pln	50	208

External Links

No external refs found!