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  5. MA_87809g0010

MA_87809g0010


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000056 (SeedPlants) Phylogenetic Tree(s): OG_06_0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_87809g0010
Cluster HCCA: Cluster_395

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000821.27 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
LOC_Os06g12560.1 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os06g50370.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10106144g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_132693g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_289646g0010 No alias E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.05 Archaeplastida
MA_465316g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_479316g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_5218469g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_69343g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_8710804g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e027277_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 107 150
No external refs found!