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  5. MA_881199g0010

MA_881199g0010


Description : Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana (sp|q9fvx2|pp129_arath : 422.0)


Gene families : OG0000152 (Archaeplastida) Phylogenetic Tree(s): OG0000152_tree ,
OG_05_0000102 (LandPlants) Phylogenetic Tree(s): OG_05_0000102_tree ,
OG_06_0001191 (SeedPlants) Phylogenetic Tree(s): OG_06_0001191_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_881199g0010
Cluster HCCA: Cluster_481

Target Alias Description ECC score Gene Family Method Actions
AT3G62470 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 Archaeplastida
Gb_13617 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.03 Archaeplastida
LOC_Os05g28720.1 No alias Pentatricopeptide repeat-containing protein At3g62470,... 0.01 Archaeplastida
Solyc01g097130.4.1 No alias Pentatricopeptide repeat-containing protein At3g62470,... 0.02 Archaeplastida
Solyc04g081950.4.1 No alias Pentatricopeptide repeat-containing protein At1g20300,... 0.02 Archaeplastida
Zm00001e031478_P001 No alias Pentatricopeptide repeat-containing protein At3g62470,... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 426 466
IPR002885 Pentatricopeptide_repeat 244 291
IPR002885 Pentatricopeptide_repeat 353 398
IPR002885 Pentatricopeptide_repeat 178 220
IPR002885 Pentatricopeptide_repeat 311 342
IPR002885 Pentatricopeptide_repeat 144 173
IPR002885 Pentatricopeptide_repeat 110 139
No external refs found!