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  5. MA_88153g0010

MA_88153g0010


Description : ligand-gated cation channel (GLR)


Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0005412 (LandPlants) Phylogenetic Tree(s): OG_05_0005412_tree ,
OG_06_0004679 (SeedPlants) Phylogenetic Tree(s): OG_06_0004679_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_88153g0010
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00178690 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.04 Archaeplastida
AMTR_s00019p00179820 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.04 Archaeplastida
AMTR_s00019p00180640 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.05 Archaeplastida
AMTR_s00019p00180760 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
AMTR_s00019p00181760 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
AMTR_s00019p00182190 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.02 Archaeplastida
AMTR_s00019p00182440 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.04 Archaeplastida
AMTR_s00019p00182630 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
AMTR_s00019p00184790 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.04 Archaeplastida
AMTR_s00019p00186040 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
AMTR_s00021p00172130 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
AMTR_s00021p00176450 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.04 Archaeplastida
AMTR_s00023p00244390 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.02 Archaeplastida
AT2G24710 GLR2.3, ATGLR2.3 glutamate receptor 2.3 0.02 Archaeplastida
AT2G24720 GLR2.2, ATGLR2.2 glutamate receptor 2.2 0.03 Archaeplastida
AT4G31710 GLR2.4, ATGLR2.4 glutamate receptor 2.4 0.04 Archaeplastida
AT5G11210 GLR2.5, ATGLR2.5 glutamate receptor 2.5 0.02 Archaeplastida
AT5G48400 ATGLR1.2, GLR1.2 Glutamate receptor family protein 0.05 Archaeplastida
AT5G48410 ATGLR1.3, GLR1.3 glutamate receptor 1.3 0.06 Archaeplastida
GSVIVT01014245001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
GSVIVT01021155001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.04 Archaeplastida
GSVIVT01022297001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.02 Archaeplastida
GSVIVT01033129001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.02 Archaeplastida
GSVIVT01033132001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.01 Archaeplastida
GSVIVT01033150001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
GSVIVT01033163001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
Gb_20613 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Gb_27767 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
Gb_28362 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Gb_28364 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
LOC_Os02g54640.1 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
LOC_Os07g01310.1 No alias ligand-gated cation channel (GLR) 0.05 Archaeplastida
LOC_Os09g26144.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_101552g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_10428186g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_10428521g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
MA_10429132g0010 No alias ligand-gated cation channel (GLR) 0.05 Archaeplastida
MA_196396g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_212254g0010 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
MA_339780g0010 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
MA_958834g0010 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
Pp3c12_5540V3.1 No alias glutamate receptor 3.3 0.02 Archaeplastida
Solyc06g063180.3.1 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Solyc06g063200.2.1 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
Solyc06g063210.3.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Solyc07g052390.3.1 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Solyc07g052400.3.1 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Solyc08g006500.4.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Zm00001e016082_P001 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Zm00001e023728_P001 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Neighborhood
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 72 362
IPR001320 Iontro_rcpt 172 274
No external refs found!