Description : plastidial mRNA processing factor (PPR10)
Gene families : OG0002673 (Archaeplastida) Phylogenetic Tree(s): OG0002673_tree ,
OG_05_0001952 (LandPlants) Phylogenetic Tree(s): OG_05_0001952_tree ,
OG_06_0001479 (SeedPlants) Phylogenetic Tree(s): OG_06_0001479_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00272430 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g18940,... | 0.03 | Archaeplastida | |
AMTR_s00029p00034670 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g02860... | 0.03 | Archaeplastida | |
AT5G02860 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Archaeplastida | |
GSVIVT01029248001 | No alias | Pentatricopeptide repeat-containing protein At2g18940,... | 0.05 | Archaeplastida | |
Gb_13589 | No alias | plastidial mRNA processing factor (PPR10) | 0.07 | Archaeplastida | |
LOC_Os05g19380.1 | No alias | plastidial mRNA processing factor (PPR10) | 0.01 | Archaeplastida | |
LOC_Os07g40120.1 | No alias | plastidial mRNA processing factor (PPR10) | 0.04 | Archaeplastida | |
MA_6146g0010 | No alias | plastidial mRNA processing factor (PPR10) | 0.04 | Archaeplastida | |
MA_96691g0010 | No alias | plastidial mRNA processing factor (PPR10) | 0.02 | Archaeplastida | |
Solyc01g107320.3.1 | No alias | plastidial mRNA processing factor (PPR10) | 0.03 | Archaeplastida | |
Solyc07g017760.1.1 | No alias | plastidial mRNA processing factor (PPR10) | 0.02 | Archaeplastida | |
Zm00001e030419_P001 | No alias | plastidial mRNA processing factor (PPR10) | 0.05 | Archaeplastida | |
Zm00001e035434_P001 | No alias | plastidial mRNA processing factor (PPR10) | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 730 | 758 |
IPR002885 | Pentatricopeptide_repeat | 230 | 291 |
IPR002885 | Pentatricopeptide_repeat | 407 | 468 |
IPR002885 | Pentatricopeptide_repeat | 368 | 395 |
IPR002885 | Pentatricopeptide_repeat | 300 | 361 |
IPR002885 | Pentatricopeptide_repeat | 478 | 537 |
IPR002885 | Pentatricopeptide_repeat | 663 | 710 |
IPR002885 | Pentatricopeptide_repeat | 558 | 605 |
IPR002885 | Pentatricopeptide_repeat | 768 | 817 |
No external refs found! |