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  5. MA_89214g0010

MA_89214g0010


Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 711.0)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree ,
OG_06_0000000 (SeedPlants) Phylogenetic Tree(s): OG_06_0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_89214g0010
Cluster HCCA: Cluster_354

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00235510 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.04 Archaeplastida
AMTR_s00032p00176600 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.05 Archaeplastida
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
AT2G39620 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Archaeplastida
AT3G12770 MEF22 mitochondrial editing factor 22 0.03 Archaeplastida
AT3G25060 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
AT3G53360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.04 Archaeplastida
GSVIVT01012201001 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.04 Archaeplastida
GSVIVT01036169001 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Gb_00194 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_00852 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida
Gb_01226 No alias RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_01327 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Gb_01648 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Gb_02060 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_03137 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_03474 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_03691 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.04 Archaeplastida
Gb_03693 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_03997 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_04417 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.05 Archaeplastida
Gb_04420 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 Archaeplastida
Gb_04428 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.04 Archaeplastida
Gb_04533 No alias RNA editing factor (OTP82) 0.06 Archaeplastida
Gb_04616 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_04844 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_05123 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 Archaeplastida
Gb_05259 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.05 Archaeplastida
Gb_05883 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida
Gb_06193 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.05 Archaeplastida
Gb_06693 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_07617 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 Archaeplastida
Gb_07727 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
Gb_08036 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Gb_08118 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.04 Archaeplastida
Gb_08569 No alias RNA editing factor (OTP82) 0.03 Archaeplastida
Gb_08619 No alias RNA editing factor (MEF19) 0.03 Archaeplastida
Gb_08744 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_08862 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 Archaeplastida
Gb_09146 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.05 Archaeplastida
Gb_09361 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
Gb_09382 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Gb_09407 No alias Pentatricopeptide repeat-containing protein At4g33990... 0.04 Archaeplastida
Gb_10151 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 Archaeplastida
Gb_10152 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 Archaeplastida
Gb_10726 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Gb_11025 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 Archaeplastida
Gb_11222 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Gb_11581 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
Gb_11667 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.03 Archaeplastida
Gb_11925 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_12240 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 Archaeplastida
Gb_12555 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
Gb_13227 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
Gb_13405 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.05 Archaeplastida
Gb_14133 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_14403 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_14445 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
Gb_15129 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.05 Archaeplastida
Gb_15507 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 Archaeplastida
Gb_16032 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.05 Archaeplastida
Gb_16070 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Gb_16515 No alias RNA editing factor (MEF11) 0.04 Archaeplastida
Gb_17092 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_17095 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Gb_17294 No alias RNA editing factor (MEF3) 0.04 Archaeplastida
Gb_17295 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.04 Archaeplastida
Gb_17620 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_18600 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 Archaeplastida
Gb_18914 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
Gb_19299 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Gb_19828 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_20503 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.06 Archaeplastida
Gb_20749 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida
Gb_21054 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_21055 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.05 Archaeplastida
Gb_21237 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Gb_21270 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.05 Archaeplastida
Gb_21443 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.05 Archaeplastida
Gb_21949 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida
Gb_22805 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_23018 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_23084 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
Gb_23124 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 Archaeplastida
Gb_23267 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
Gb_23798 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
Gb_23934 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
Gb_24515 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.06 Archaeplastida
Gb_24674 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
Gb_25046 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
Gb_25283 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_25359 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
Gb_25869 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.04 Archaeplastida
Gb_26158 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_26501 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Gb_26526 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.04 Archaeplastida
Gb_27176 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_27462 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 Archaeplastida
Gb_27797 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_28030 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.03 Archaeplastida
Gb_28288 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Gb_29543 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
Gb_30004 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.05 Archaeplastida
Gb_30146 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
Gb_30147 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 Archaeplastida
Gb_30190 No alias Pentatricopeptide repeat-containing protein At1g18485... 0.03 Archaeplastida
Gb_30661 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_30918 No alias RNA editing factor (OTP82) 0.05 Archaeplastida
Gb_30993 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_31546 No alias RNA editing factor (MEF3) 0.04 Archaeplastida
Gb_32227 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_32447 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.03 Archaeplastida
Gb_33328 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_33374 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.04 Archaeplastida
Gb_33575 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_33718 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_34248 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_34298 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_34963 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Gb_35396 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.04 Archaeplastida
Gb_35407 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
Gb_35645 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.04 Archaeplastida
Gb_35886 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.04 Archaeplastida
Gb_36177 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.04 Archaeplastida
Gb_36365 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
Gb_36636 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
Gb_36806 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
Gb_37509 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.05 Archaeplastida
Gb_37516 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_38158 No alias OTP70 plastidial RNA splicing factor 0.04 Archaeplastida
Gb_38232 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_38248 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_38249 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_38417 No alias OTP70 plastidial RNA splicing factor 0.04 Archaeplastida
Gb_38441 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.04 Archaeplastida
Gb_38504 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Gb_38750 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_38751 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
Gb_39298 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_40436 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_41317 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
Gb_41804 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
LOC_Os01g62910.1 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.03 Archaeplastida
LOC_Os01g74600.1 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
LOC_Os03g44210.2 No alias RNA editing factor (SEL1/PDM1) 0.03 Archaeplastida
LOC_Os03g63260.3 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
LOC_Os08g25280.1 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.03 Archaeplastida
MA_10311934g0010 No alias Pentatricopeptide repeat-containing protein At1g15510,... 0.04 Archaeplastida
MA_10427342g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 Archaeplastida
MA_104937g0010 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.07 Archaeplastida
MA_107356g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
MA_114722g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_11765g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
MA_122899g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.05 Archaeplastida
MA_136188g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
MA_138190g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_141034g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 Archaeplastida
MA_174226g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
MA_215359g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
MA_25584g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
MA_285318g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.05 Archaeplastida
MA_3471g0010 No alias RNA editing factor (MEF19) 0.06 Archaeplastida
MA_36643g0010 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 Archaeplastida
MA_502206g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.04 Archaeplastida
MA_511569g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 Archaeplastida
MA_52613g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 Archaeplastida
MA_63139g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
MA_73895g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
MA_805687g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 Archaeplastida
MA_8319g0010 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.04 Archaeplastida
MA_84538g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
MA_90090g0010 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.05 Archaeplastida
MA_9384g0020 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.04 Archaeplastida
MA_944980g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.05 Archaeplastida
Pp3c24_8560V3.1 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Archaeplastida
Smo137234 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Smo171135 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.03 Archaeplastida
Smo34426 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.03 Archaeplastida
Smo42377 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.03 Archaeplastida
Smo70138 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Smo79457 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
Smo82058 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
Smo92471 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
Solyc03g025700.2.1 No alias OTP70 plastidial RNA splicing factor 0.03 Archaeplastida
Solyc05g006800.2.1 No alias Pentatricopeptide repeat-containing protein At1g59720,... 0.03 Archaeplastida
Zm00001e003284_P001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Zm00001e003605_P001 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
Zm00001e004121_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e005246_P001 No alias Pentatricopeptide repeat-containing protein At2g41080... 0.03 Archaeplastida
Zm00001e011748_P001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.03 Archaeplastida
Zm00001e015727_P001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.02 Archaeplastida
Zm00001e016923_P001 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.02 Archaeplastida
Zm00001e030887_P001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Zm00001e031351_P001 No alias RNA editing factor (ECD1) 0.05 Archaeplastida
Zm00001e034445_P001 No alias Pentatricopeptide repeat-containing protein At5g48910... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0019867 outer membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 216 264
IPR002885 Pentatricopeptide_repeat 115 163
IPR002885 Pentatricopeptide_repeat 318 365
IPR002885 Pentatricopeptide_repeat 419 466
IPR002885 Pentatricopeptide_repeat 14 62
IPR002885 Pentatricopeptide_repeat 493 517
IPR002885 Pentatricopeptide_repeat 393 418
IPR002885 Pentatricopeptide_repeat 292 317
IPR032867 DYW_dom 592 716
No external refs found!